CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSCJAG00000021904
(
Callithrix jacchus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCJAG00000021904
T35699_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000050782
RRM
35
103
IFVGSLRYRTTDASLRKYFEDFGDIKEAVVIFDPQTGKSRGYGFVTMANPAAAQRACEDPHPVIDGRKT
Links
Other
RRM
family RBPs
Other
Callithrix jacchus
RBPs
63 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM38
Homo sapiens
ENSG00000132819
I
0.797
Rbm38
Mus musculus
ENSMUSG00000027510
D
0.797
D3ZGE9_RAT
Rattus norvegicus
ENSRNOG00000006420
I
0.797
RBM38
Macaca mulatta
ENSMMUG00000031391
I
0.797
Rbm24
Rattus norvegicus
ENSRNOG00000016925
I
0.797
RBM38
Sus scrofa
ENSSSCG00000007504
I
0.797
Rbm24
Mus musculus
ENSMUSG00000038132
I
0.797
RBM38
Bos taurus
ENSBTAG00000008105
I
0.797
LOC100404144
Callithrix jacchus
ENSCJAG00000019139
I
0.797
RBM38
Cavia porcellus
ENSCPOG00000012781
I
0.797
RBM24
Sus scrofa
ENSSSCG00000001066
I
0.783
ENSPPYG00000016256
Pongo pygmaeus
ENSPPYG00000016256
I
0.783
RBM24
Pteropus vampyrus
ENSPVAG00000004954
I
0.783
RBM24
Cavia porcellus
ENSCPOG00000008838
I
0.783
rbm38
Xenopus tropicalis
ENSXETG00000011268
I
0.783
CAB96420
Xenopus laevis
CAB96420
I
0.783
Q6GQD3
Xenopus laevis
Q6GQD3
I
0.783
Q9I8B3
Xenopus laevis
Q9I8B3
I
0.783
RBM24
Callithrix jacchus
ENSCJAG00000006579
I
0.783
AAH72812
Xenopus laevis
AAH72812
I
0.783
AAH44956
Xenopus laevis
AAH44956
I
0.783
RBM24
Tursiops truncatus
ENSTTRG00000000393
I
0.783
RBM24
Procavia capensis
ENSPCAG00000015152
I
0.783
rbm24
Xenopus tropicalis
ENSXETG00000024618
I
0.783
RBM24
Taeniopygia guttata
ENSTGUG00000005984
I
0.783
RBM24
Pan troglodytes
ENSPTRG00000017749
I
0.783
RBM24
Loxodonta africana
ENSLAFG00000000116
I
0.783
RBM24
Gorilla gorilla
ENSGGOG00000013628
I
0.783
RBM24
Gallus gallus
ENSGALG00000012712
I
0.783
RBM38
Monodelphis domestica
ENSMODG00000016458
I
0.783
RBM24
Homo sapiens
ENSG00000112183
D
0.783
RBM24
Ornithorhynchus anatinus
ENSOANG00000011865
I
0.783
RBM24
Tetraodon nigroviridis
ENSTNIG00000018417
I
0.768
AAH72792
Xenopus laevis
AAH72792
I
0.768
Q7T3I7
Xenopus laevis
Q7T3I7
I
0.768
RBM38
Erinaceus europaeus
ENSEEUG00000013489
I
0.768
RBM24
Anolis carolinensis
ENSACAG00000003962
I
0.768
RBM24
Takifugu rubripes
ENSTRUG00000014826
I
0.768
AAP42281
Xenopus laevis
AAP42281
I
0.768
ENSDARG00000058818
Danio rerio
ENSDARG00000058818
D
0.768
RBM38
Ornithorhynchus anatinus
ENSOANG00000009259
I
0.768
RBM38
Pan troglodytes
ENSPTRG00000013661
I
0.768
RBM24
Oryzias latipes
ENSORLG00000007916
I
0.768
RBM24
Monodelphis domestica
ENSMODG00000010899
I
0.768
RBM24
Myotis lucifugus
ENSMLUG00000016451
I
0.768
ENSCSAVG00000001132
Ciona savignyi
ENSCSAVG00000001132
I
0.754
RBM24
Gasterosteus aculeatus
ENSGACG00000005383
I
0.754
rbm24b
Danio rerio
ENSDARG00000031809
I
0.754
rbm24a
Danio rerio
ENSDARG00000078293
I
0.754
ENSDARG00000075681
Danio rerio
ENSDARG00000075681
I
0.754
RBM38
Takifugu rubripes
ENSTRUG00000010969
I
0.754
RBM38
Tetraodon nigroviridis
ENSTNIG00000007093
I
0.754
RBM38
Tupaia belangeri
ENSTBEG00000001689
I
0.754
RBM24
Microcebus murinus
ENSMICG00000011880
I
0.754
RBM24
Oryzias latipes
ENSORLG00000012546
I
0.754
ENSTNIG00000009181
Tetraodon nigroviridis
ENSTNIG00000009181
D
0.754
RBM24
Takifugu rubripes
ENSTRUG00000010089
I
0.754
AAF81070
Xenopus laevis
AAF81070
I
0.754
gw1.9.44.1
Lottia gigantea
gw1.9.44.1
I
0.739
RBM24
Gasterosteus aculeatus
ENSGACG00000008472
I
0.739
RBM38
Oryzias latipes
ENSORLG00000012154
I
0.739
RBM38
Takifugu rubripes
ENSTRUG00000004291
I
0.739
RBM38
Gasterosteus aculeatus
ENSGACG00000015224
I
0.739