ENSCSAVG00000005757 (Ciona savignyi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCSAVG00000005757 T35985_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000009805 RRM 19 68
ENSCSAVP00000009806 RRM 152 191

Links

Other RRM family RBPs
Other Ciona savignyi RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Rbfox1 Dipodomys ordii ENSDORG00000010024 N 0.825
RBFOX1 Microcebus murinus ENSMICG00000003371 N 0.825
ENSTRUG00000002748 Takifugu rubripes ENSTRUG00000002748 I 0.786
GL15466 Drosophila persimilis FBgn0153070 N 0.756
Rbm9 Rattus norvegicus ENSRNOG00000004688 I 0.717
RBFOX1 Tetraodon nigroviridis ENSTNIG00000002567 N 0.717
RBFOX1 Canis familiaris ENSCAFG00000019082 I 0.717
ENSTRUG00000004894 Takifugu rubripes ENSTRUG00000004894 I 0.717
Hrnbp3 Rattus norvegicus ENSRNOG00000003386 I 0.717
Rbfox1 Mus musculus ENSMUSG00000008658 I 0.717
ENSMODG00000002089 Monodelphis domestica ENSMODG00000002089 I 0.717
ENSGACG00000015968 Gasterosteus aculeatus ENSGACG00000015968 I 0.717
A2bp1 Rattus norvegicus ENSRNOG00000002827 I 0.717
Rbfox3 Mus musculus ENSMUSG00000025576 I 0.717
Rbfox2 Mus musculus ENSMUSG00000033565 I 0.717
ENSORLG00000004268 Oryzias latipes ENSORLG00000004268 N 0.702
FOX1C_BOVIN Bos taurus ENSBTAG00000006280 I 0.702
AAH72029 Xenopus laevis AAH72029 N 0.702
RBFOX3 Tupaia belangeri ENSTBEG00000004296 N 0.700