RBFOX1 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000002567 T42012_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000005118 RRM 30 75

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A2bp1 Rattus norvegicus ENSRNOG00000002827 I 1.000
ENSMODG00000002089 Monodelphis domestica ENSMODG00000002089 I 1.000
Rbfox1 Mus musculus ENSMUSG00000008658 I 1.000
Rbfox3 Mus musculus ENSMUSG00000025576 I 1.000
Rbfox2 Mus musculus ENSMUSG00000033565 I 1.000
Hrnbp3 Rattus norvegicus ENSRNOG00000003386 I 1.000
ENSTRUG00000004894 Takifugu rubripes ENSTRUG00000004894 I 1.000
Rbm9 Rattus norvegicus ENSRNOG00000004688 I 1.000
RBFOX1 Canis familiaris ENSCAFG00000019082 I 1.000
FOX1C_BOVIN Bos taurus ENSBTAG00000006280 I 0.979
ENSTRUG00000002748 Takifugu rubripes ENSTRUG00000002748 I 0.848
ENSORLG00000004268 Oryzias latipes ENSORLG00000004268 N 0.830
AAH72029 Xenopus laevis AAH72029 N 0.830
RBFOX1 Microcebus murinus ENSMICG00000003371 N 0.826
Rbfox1 Dipodomys ordii ENSDORG00000010024 N 0.826
ENSGACG00000015968 Gasterosteus aculeatus ENSGACG00000015968 I 0.804
GL15466 Drosophila persimilis FBgn0153070 N 0.783
RBFOX3 Tupaia belangeri ENSTBEG00000004296 N 0.717
ENSCSAVG00000005757 Ciona savignyi ENSCSAVG00000005757 N 0.717