CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TIAL1
(
Gorilla gorilla
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGGOG00000001816
T37755_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
TIA1
M156_0.6
Homo sapiens
WUUUUUB
RNAcompete
Ray et al.(2013)
RNCMPT00165
0.706
TIA1
M075_0.6
Homo sapiens
UUUUUBK
RNAcompete
Ray et al.(2013)
RNCMPT00077
0.706
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000001791
RRM
46
94
RRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVK
ENSGGOP00000001791
RRM
114
184
VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR
ENSGGOP00000001791
RRM
222
286
VYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK
Links
Other
RRM
family RBPs
Other
Gorilla gorilla
RBPs
50 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TIAL1
Tursiops truncatus
ENSTTRG00000014574
I
0.995
TIAL1
Macropus eugenii
ENSMEUG00000013120
N
0.930
TIAL1
Ornithorhynchus anatinus
ENSOANG00000004896
I
0.914
TIAL1
Callithrix jacchus
ENSCJAG00000019682
I
0.910
TIAL1
Homo sapiens
ENSG00000151923
D
0.910
TIAL1
Macaca mulatta
ENSMMUG00000001472
I
0.910
TIA1
Sorex araneus
ENSSARG00000001997
I
0.838
ENSPPYG00000002703
Pongo pygmaeus
ENSPPYG00000002703
I
0.833
TIAL1
Tarsius syrichta
ENSTSYG00000004348
I
0.833
TIAL1
Pan troglodytes
ENSPTRG00000002996
I
0.833
Tial1
Rattus norvegicus
ENSRNOG00000020271
I
0.833
Q800W1_CHICK
Gallus gallus
ENSGALG00000009427
I
0.833
TIAL1
Canis familiaris
ENSCAFG00000012171
I
0.833
TIAL1
Monodelphis domestica
ENSMODG00000008865
I
0.833
Tial1
Mus musculus
ENSMUSG00000030846
I
0.833
TIAL1
Pteropus vampyrus
ENSPVAG00000017585
I
0.829
TIAL1
Procavia capensis
ENSPCAG00000003192
I
0.829
TIAL1
Oryctolagus cuniculus
ENSOCUG00000003783
I
0.793
TIAL1
Equus caballus
ENSECAG00000009970
I
0.789
A1A4R7_BOVIN
Bos taurus
ENSBTAG00000004080
I
0.789
ENSSSCG00000010685
Sus scrofa
ENSSSCG00000010685
I
0.789
TIAL1
Takifugu rubripes
ENSTRUG00000017931
I
0.784
Tial1
Dipodomys ordii
ENSDORG00000010683
I
0.779
TIAL1
Anolis carolinensis
ENSACAG00000016986
I
0.771
tial1
Danio rerio
ENSDARG00000009525
I
0.743
TIA1
Procavia capensis
ENSPCAG00000001859
I
0.721
TIA1
Canis familiaris
ENSCAFG00000003341
I
0.714
TIA1
Monodelphis domestica
ENSMODG00000011515
I
0.714
Ame_R002705
Ailuropoda melanoleuca
Ame_R002705
I
0.714
TIA1
Dasypus novemcinctus
ENSDNOG00000016356
I
0.714
TIA1
Gasterosteus aculeatus
ENSGACG00000013294
I
0.712
Q0VBZ6_BOVIN
Bos taurus
ENSBTAG00000019182
I
0.711
TIA1
Loxodonta africana
ENSLAFG00000003463
I
0.711
Tia1
Mus musculus
ENSMUSG00000071337
I
0.711
ENSACAG00000009648
Anolis carolinensis
ENSACAG00000009648
I
0.711
TIA1
Meleagris gallopavo
ENSMGAG00000003493
I
0.710
TIAL1
Gasterosteus aculeatus
ENSGACG00000003365
I
0.708
TIAL1
Ochotona princeps
ENSOPRG00000016546
I
0.707
Q800W4_CHICK
Gallus gallus
ENSGALG00000013879
I
0.706
TIA1
Macaca mulatta
ENSMMUG00000001126
I
0.706
TIA1
Echinops telfairi
ENSETEG00000010021
I
0.706
TIA1
Homo sapiens
ENSG00000116001
D
0.706
TIA1
Oryctolagus cuniculus
ENSOCUG00000011204
I
0.706
TIA1
Pan troglodytes
ENSPTRG00000023495
I
0.706
TIA1
Pteropus vampyrus
ENSPVAG00000004846
I
0.706
TIA1
Tursiops truncatus
ENSTTRG00000001195
I
0.706
TIA1
Otolemur garnettii
ENSOGAG00000010572
I
0.706
TIA1
Callithrix jacchus
ENSCJAG00000019278
I
0.706
Tia1
Rattus norvegicus
ENSRNOG00000016813
I
0.706
TIA1
Cavia porcellus
ENSCPOG00000008327
I
0.706