TIA1 (Procavia capensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPCAG00000001859 T40289_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.726
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.726
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000001738 RRM 37 77
ENSPCAP00000001738 RRM 108 161
ENSPCAP00000001738 RRM 216 280

Links

Other RRM family RBPs
Other Procavia capensis RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TIA1 Sorex araneus ENSSARG00000001997 I 0.859
TIA1 Erinaceus europaeus ENSEEUG00000002964 N 0.812
TIAL1 Homo sapiens ENSG00000151923 D 0.774
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.774
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.774
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.774
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.745
TIA1 Canis familiaris ENSCAFG00000003341 I 0.745
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.745
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.745
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.741
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.741
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.741
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.740
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.738
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.737
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.737
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.737
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.737
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.737
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.737
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.737
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.737
TIA1 Homo sapiens ENSG00000116001 D 0.737
TIA1 Echinops telfairi ENSETEG00000010021 I 0.737
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.737
Tia1 Mus musculus ENSMUSG00000071337 I 0.732
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.727
TIAL1 Tursiops truncatus ENSTTRG00000014574 I 0.725
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.722
TIAL1 Gorilla gorilla ENSGGOG00000001816 I 0.721
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.712
AAH80105 Xenopus laevis AAH80105 I 0.707
TIA1 Oryzias latipes ENSORLG00000015642 I 0.702