CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMEUG00000007283
(
Macropus eugenii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMEUG00000007283
T38215_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000006648
RRM
39
105
VFAGGIGVKMDETEIQSFFARYGLVKEVKIITDTGISKGYGFVYFYNDVDVQKIIESQINFHGKKLK
Links
Other
RRM
family RBPs
Other
Macropus eugenii
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Dazl
Dipodomys ordii
ENSDORG00000011497
N
0.868
ENSSARG00000008473
Sorex araneus
ENSSARG00000008473
N
0.853
Ame_R003159
Ailuropoda melanoleuca
Ame_R003159
N
0.853
ENSCAFG00000005867
Canis familiaris
ENSCAFG00000005867
N
0.853
Dazl
Rattus norvegicus
ENSRNOG00000023474
N
0.853
A3DUJ0_BOVIN
Bos taurus
ENSBTAG00000000502
N
0.853
ENSTBEG00000012225
Tupaia belangeri
ENSTBEG00000012225
N
0.853
Dazl
Mus musculus
ENSMUSG00000010592
N
0.853
XM_001380213.1
Monodelphis domestica
ENSMODG00000014730
N
0.853
ENSOGAG00000006983
Otolemur garnettii
ENSOGAG00000006983
N
0.853
ENSOCUG00000012635
Oryctolagus cuniculus
ENSOCUG00000012635
N
0.853
O77584_PANTR
Pan troglodytes
ENSPTRG00000014674
N
0.838
LOC100063430
Equus caballus
ENSECAG00000010923
N
0.838
ENSEEUG00000005973
Erinaceus europaeus
ENSEEUG00000005973
N
0.838
DAZL
Homo sapiens
ENSG00000092345
N
0.838
ENSVPAG00000000468
Vicugna pacos
ENSVPAG00000000468
N
0.838
DAZL
Gorilla gorilla
ENSGGOG00000023632
N
0.838
DAZL
Pteropus vampyrus
ENSPVAG00000007836
N
0.838
ENSPPYG00000014080
Pongo pygmaeus
ENSPPYG00000014080
N
0.838
DAZL
Loxodonta africana
ENSLAFG00000009132
N
0.838
O77586_MACMU
Macaca mulatta
ENSMMUG00000011361
N
0.838
ENSTSYG00000000788
Tarsius syrichta
ENSTSYG00000000788
N
0.824
DAZL
Procavia capensis
ENSPCAG00000016182
N
0.824
ENSCPOG00000007628
Cavia porcellus
ENSCPOG00000007628
N
0.809
DAZ4
Homo sapiens
ENSG00000205916
N
0.765
DAZ3
Homo sapiens
ENSG00000187191
N
0.765
DAZ2
Homo sapiens
ENSG00000205944
N
0.765
DAZ1
Homo sapiens
ENSG00000188120
N
0.765
DAZL
Choloepus hoffmanni
ENSCHOG00000005264
N
0.750
Q9TV38_PANTR
Pan troglodytes
ENSPTRG00000033761
N
0.735
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000023120
N
0.735
Q9TV38_PANTR
Pan troglodytes
ENSPTRG00000022523
N
0.735
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000028811
N
0.735
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000022519
N
0.735