CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DAZL
(
Choloepus hoffmanni
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCHOG00000005264
T35280_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000004661
RRM
17
78
SPPMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQINFHGKKLK
Links
Other
RRM
family RBPs
Other
Choloepus hoffmanni
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DAZL
Homo sapiens
ENSG00000092345
N
0.952
DAZL
Gorilla gorilla
ENSGGOG00000023632
N
0.868
ENSPPYG00000014080
Pongo pygmaeus
ENSPPYG00000014080
N
0.868
O77586_MACMU
Macaca mulatta
ENSMMUG00000011361
N
0.868
O77584_PANTR
Pan troglodytes
ENSPTRG00000014674
N
0.868
Ame_R003159
Ailuropoda melanoleuca
Ame_R003159
N
0.853
A3DUJ0_BOVIN
Bos taurus
ENSBTAG00000000502
N
0.853
ENSTBEG00000012225
Tupaia belangeri
ENSTBEG00000012225
N
0.853
ENSVPAG00000000468
Vicugna pacos
ENSVPAG00000000468
N
0.853
ENSTSYG00000000788
Tarsius syrichta
ENSTSYG00000000788
N
0.853
ENSSARG00000008473
Sorex araneus
ENSSARG00000008473
N
0.853
Dazl
Rattus norvegicus
ENSRNOG00000023474
N
0.853
DAZL
Pteropus vampyrus
ENSPVAG00000007836
N
0.853
ENSOCUG00000012635
Oryctolagus cuniculus
ENSOCUG00000012635
N
0.853
ENSOGAG00000006983
Otolemur garnettii
ENSOGAG00000006983
N
0.853
ENSCAFG00000005867
Canis familiaris
ENSCAFG00000005867
N
0.853
ENSEEUG00000005973
Erinaceus europaeus
ENSEEUG00000005973
N
0.853
Dazl
Mus musculus
ENSMUSG00000010592
N
0.853
LOC100063430
Equus caballus
ENSECAG00000010923
N
0.853
XM_001380213.1
Monodelphis domestica
ENSMODG00000014730
N
0.853
DAZ1
Homo sapiens
ENSG00000188120
N
0.839
DAZ4
Homo sapiens
ENSG00000205916
N
0.839
DAZL
Loxodonta africana
ENSLAFG00000009132
N
0.838
DAZL
Procavia capensis
ENSPCAG00000016182
N
0.838
Dazl
Dipodomys ordii
ENSDORG00000011497
N
0.838
ENSCPOG00000007628
Cavia porcellus
ENSCPOG00000007628
N
0.838
DAZ3
Homo sapiens
ENSG00000187191
N
0.765
DAZ2
Homo sapiens
ENSG00000205944
N
0.765
Q9TV38_PANTR
Pan troglodytes
ENSPTRG00000022523
N
0.750
ENSMEUG00000007283
Macropus eugenii
ENSMEUG00000007283
N
0.750
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000022519
N
0.750
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000023120
N
0.750
Q56GW9_PANTR
Pan troglodytes
ENSPTRG00000028811
N
0.750
Q9TV38_PANTR
Pan troglodytes
ENSPTRG00000033761
N
0.750
O57437
Xenopus laevis
O57437
N
0.706
AAC41242
Xenopus laevis
AAC41242
N
0.706
DAZL
Taeniopygia guttata
ENSTGUG00000003145
N
0.706
AAI70359
Xenopus laevis
AAI70359
N
0.706
AAI70361
Xenopus laevis
AAI70361
N
0.706