Q56GW9_PANTR (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000023120 T40794_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000042049 RRM 35 102
ENSPTRP00000046561 RRM 35 102
ENSPTRP00000048434 RRM 35 102
ENSPTRP00000048435 RRM 42 109
ENSPTRP00000048436 RRM 35 102
ENSPTRP00000048437 RRM 42 109
ENSPTRP00000055097 RRM 35 101
ENSPTRP00000055099 RRM 35 101
ENSPTRP00000055103 RRM 35 101
ENSPTRP00000055105 RRM 42 109
ENSPTRP00000055108 RRM 40 96
ENSPTRP00000055110 RRM 35 102
ENSPTRP00000055118 RRM 35 101
ENSPTRP00000055125 RRM 40 107
ENSPTRP00000055127 RRM 40 107
ENSPTRP00000055458 RRM 42 109
ENSPTRP00000055458 RRM 207 274
ENSPTRP00000055795 RRM 42 109
ENSPTRP00000055795 RRM 207 274
ENSPTRP00000055918 RRM 42 109
ENSPTRP00000056182 RRM 40 107
ENSPTRP00000056254 RRM 42 109
ENSPTRP00000056383 RRM 40 96
ENSPTRP00000058645 RRM 35 101
ENSPTRP00000059309 RRM 40 107

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q9TV38_PANTR Pan troglodytes ENSPTRG00000022523 N 1.000
Q56GW9_PANTR Pan troglodytes ENSPTRG00000022519 N 1.000
Q9TV38_PANTR Pan troglodytes ENSPTRG00000033761 N 1.000
Q56GW9_PANTR Pan troglodytes ENSPTRG00000028811 N 1.000
DAZ2 Homo sapiens ENSG00000205944 N 0.912
DAZ3 Homo sapiens ENSG00000187191 N 0.912
DAZ4 Homo sapiens ENSG00000205916 N 0.912
DAZ1 Homo sapiens ENSG00000188120 N 0.912
DAZL Procavia capensis ENSPCAG00000016182 N 0.882
A3DUJ0_BOVIN Bos taurus ENSBTAG00000000502 N 0.868
ENSCAFG00000005867 Canis familiaris ENSCAFG00000005867 N 0.868
ENSEEUG00000005973 Erinaceus europaeus ENSEEUG00000005973 N 0.868
XM_001380213.1 Monodelphis domestica ENSMODG00000014730 N 0.868
DAZL Homo sapiens ENSG00000092345 N 0.868
O77586_MACMU Macaca mulatta ENSMMUG00000011361 N 0.868
ENSOCUG00000012635 Oryctolagus cuniculus ENSOCUG00000012635 N 0.868
Ame_R003159 Ailuropoda melanoleuca Ame_R003159 N 0.868
Dazl Mus musculus ENSMUSG00000010592 N 0.868
Dazl Rattus norvegicus ENSRNOG00000023474 N 0.868
ENSSARG00000008473 Sorex araneus ENSSARG00000008473 N 0.868
O77584_PANTR Pan troglodytes ENSPTRG00000014674 N 0.868
DAZL Pteropus vampyrus ENSPVAG00000007836 N 0.868
DAZL Gorilla gorilla ENSGGOG00000023632 N 0.868
ENSOGAG00000006983 Otolemur garnettii ENSOGAG00000006983 N 0.868
ENSPPYG00000014080 Pongo pygmaeus ENSPPYG00000014080 N 0.868
ENSTBEG00000012225 Tupaia belangeri ENSTBEG00000012225 N 0.868
Dazl Dipodomys ordii ENSDORG00000011497 N 0.853
DAZL Loxodonta africana ENSLAFG00000009132 N 0.853
LOC100063430 Equus caballus ENSECAG00000010923 N 0.853
ENSVPAG00000000468 Vicugna pacos ENSVPAG00000000468 N 0.853
ENSTSYG00000000788 Tarsius syrichta ENSTSYG00000000788 N 0.853
ENSCPOG00000007628 Cavia porcellus ENSCPOG00000007628 N 0.838
ENSCJAG00000003593 Callithrix jacchus ENSCJAG00000003593 N 0.814
AAI70359 Xenopus laevis AAI70359 N 0.750
AAC41242 Xenopus laevis AAC41242 N 0.750
AAI70361 Xenopus laevis AAI70361 N 0.750
O57437 Xenopus laevis O57437 N 0.750
DAZL Choloepus hoffmanni ENSCHOG00000005264 N 0.750
AAH71023 Xenopus laevis AAH71023 N 0.735
ENSMEUG00000007283 Macropus eugenii ENSMEUG00000007283 N 0.735
AAH97658 Xenopus laevis AAH97658 N 0.735
ENSMGAG00000010878 Meleagris gallopavo ENSMGAG00000010878 N 0.735
Q4V7Y4 Xenopus laevis Q4V7Y4 N 0.735
DAZL_CHICK Gallus gallus ENSGALG00000011243 N 0.735
DAZL Taeniopygia guttata ENSTGUG00000003145 N 0.721
DAZL Dasypus novemcinctus ENSDNOG00000019085 N 0.710