CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SRSF3
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000010671
T38718_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000009724
RRM
12
73
VYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGXXXXX
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
49 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SRSF3
Choloepus hoffmanni
ENSCHOG00000002515
N
1.000
SRSF3
Erinaceus europaeus
ENSEEUG00000001119
N
1.000
SRSF3
Otolemur garnettii
ENSOGAG00000000502
N
1.000
SRSF3
Meleagris gallopavo
ENSMGAG00000002503
I
0.864
Q9XSU6_CANFA
Canis familiaris
ENSCAFG00000001414
I
0.864
srsf3
Xenopus tropicalis
ENSXETG00000001701
I
0.864
SFRS3_BOVIN
Bos taurus
ENSBTAG00000040006
I
0.864
SRSF3
Anolis carolinensis
ENSACAG00000016637
I
0.864
Ame_R002060
Ailuropoda melanoleuca
Ame_R002060
I
0.864
LOC100408013
Callithrix jacchus
ENSCJAG00000016062
I
0.864
SRSF3
Macaca mulatta
ENSMMUG00000014306
I
0.864
ENSDORG00000012283
Dipodomys ordii
ENSDORG00000012283
I
0.864
SFRS3
Gallus gallus
ENSGALG00000000533
I
0.864
SRSF3
Gorilla gorilla
ENSGGOG00000017186
I
0.864
ENSLAFG00000018193
Loxodonta africana
ENSLAFG00000018193
I
0.864
SRSF3
Homo sapiens
ENSG00000112081
I
0.864
SRSF3
Felis catus
ENSFCAG00000001084
I
0.864
SRSF3
Vicugna pacos
ENSVPAG00000005481
I
0.864
LOC100053336
Equus caballus
ENSECAG00000018741
I
0.864
SRSF3
Echinops telfairi
ENSETEG00000010117
I
0.864
SRSF3
Cavia porcellus
ENSCPOG00000003722
I
0.864
SRSF3
Microcebus murinus
ENSMICG00000004674
I
0.864
SRSF3
Tursiops truncatus
ENSTTRG00000013447
I
0.864
Srsf3
Mus musculus
ENSMUSG00000071172
I
0.864
SRSF3
Pteropus vampyrus
ENSPVAG00000014621
I
0.864
XR_022443.1
Pan troglodytes
ENSPTRG00000018106
I
0.864
ENSPPYG00000016548
Pongo pygmaeus
ENSPPYG00000016548
I
0.864
SRSF3
Oryctolagus cuniculus
ENSOCUG00000006684
I
0.864
SRSF3
Ochotona princeps
ENSOPRG00000006006
I
0.864
SRSF3
Sus scrofa
ENSSSCG00000001564
I
0.864
Sfrs3
Rattus norvegicus
ENSRNOG00000000520
I
0.864
SFRS3
Taeniopygia guttata
ENSTGUG00000000928
I
0.864
SRSF3
Tupaia belangeri
ENSTBEG00000012272
I
0.864
SRSF3
Spermophilus tridecemlineatus
ENSSTOG00000014280
I
0.864
SRSF3
Monodelphis domestica
ENSMODG00000013539
I
0.864
SRSF3
Tetraodon nigroviridis
ENSTNIG00000001003
I
0.848
SRSF3
Oryzias latipes
ENSORLG00000000292
I
0.848
AAH46661
Xenopus laevis
AAH46661
I
0.848
Gm12355
Mus musculus
ENSMUSG00000078134
I
0.848
SRSF7
Spermophilus tridecemlineatus
ENSSTOG00000004389
N
0.839
SRSF3
Gasterosteus aculeatus
ENSGACG00000001042
N
0.833
srsf3b
Danio rerio
ENSDARG00000059360
I
0.833
SRSF3
Tetraodon nigroviridis
ENSTNIG00000014643
N
0.833
srsf3a
Danio rerio
ENSDARG00000025397
I
0.833
SRSF3
Oryzias latipes
ENSORLG00000020054
I
0.833
ENSLAFG00000026731
Loxodonta africana
ENSLAFG00000026731
N
0.818
SRSF3
Gasterosteus aculeatus
ENSGACG00000001473
N
0.818
estExt_fgenesh1_pm.C_10147
Daphnia pulex
estExt_fgenesh1_pm.C_10147
I
0.712
PHUM565080
Pediculus humanus
PHUM565080
I
0.712