RAVER1 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000005458 T40132_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000006869 RRM 56 119
ENSORLP00000006869 RRM 129 199
ENSORLP00000006869 RRM 218 287
ENSORLP00000006870 RRM 96 159
ENSORLP00000006870 RRM 169 239

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
raver1 Danio rerio ENSDARG00000052617 N 0.948
RAVER1 Tetraodon nigroviridis ENSTNIG00000018570 N 0.911
TYK2 Takifugu rubripes ENSTRUG00000009121 N 0.893
RAVER1 Gasterosteus aculeatus ENSGACG00000013818 N 0.893
RAVER1 Procavia capensis ENSPCAG00000002699 N 0.785
Raver1 Mus musculus ENSMUSG00000010205 N 0.778
Raver1 Rattus norvegicus ENSRNOG00000020710 N 0.778
RAVER1 Tursiops truncatus ENSTTRG00000009552 N 0.714
RAVER1 Cavia porcellus ENSCPOG00000001008 N 0.714
RAVER1 Microcebus murinus ENSMICG00000010326 N 0.709
A4FUZ2_BOVIN Bos taurus ENSBTAG00000015721 N 0.709
RAVER1 Canis familiaris ENSCAFG00000017861 N 0.709
RAVER1 Pteropus vampyrus ENSPVAG00000003689 N 0.709
RAVER1 Loxodonta africana ENSLAFG00000003664 N 0.704
RAVER1 Sus scrofa ENSSSCG00000013650 N 0.704
RAVER1 Spermophilus tridecemlineatus ENSSTOG00000003241 N 0.704
Raver1 Dipodomys ordii ENSDORG00000010106 N 0.704
RAVER1 Felis catus ENSFCAG00000009435 N 0.704