CIRBP (Microcebus murinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMICG00000015962 T38585_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM3
M048_0.6 		Homo sapiens RADACKA RNAcompete
Ray et al.(2013)
RNCMPT00050 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000014543 RRM 8 78

Links

Other RRM family RBPs
Other Microcebus murinus RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CIRBP Monodelphis domestica ENSMODG00000005290 I 0.986
CIRBP Felis catus ENSFCAG00000013724 I 0.986
CIRBP Meleagris gallopavo ENSMGAG00000010253 I 0.972
LOC706175 Macaca mulatta ENSMMUG00000022101 I 0.972
CIRBP Sus scrofa ENSSSCG00000013427 I 0.972
CIRBP Taeniopygia guttata ENSTGUG00000000884 I 0.972
CIRBP Tursiops truncatus ENSTTRG00000011049 I 0.972
CIRBP Canis familiaris ENSCAFG00000019506 I 0.972
CIRBP Homo sapiens ENSG00000099622 I 0.972
CIRBP Pteropus vampyrus ENSPVAG00000005629 I 0.972
CIRBP Ornithorhynchus anatinus ENSOANG00000012230 I 0.972
CIRBP Anolis carolinensis ENSACAG00000000441 I 0.972
CIRBP Loxodonta africana ENSLAFG00000032156 I 0.972
CIRBP Gorilla gorilla ENSGGOG00000002338 I 0.972
Ame_R011907 Ailuropoda melanoleuca Ame_R011907 I 0.972
Q3SZN4_BOVIN Bos taurus ENSBTAG00000007480 I 0.972
LOC100394350 Callithrix jacchus ENSCJAG00000005504 I 0.972
Cirbp Rattus norvegicus ENSRNOG00000015999 I 0.958
Q45KQ2_CHICK Gallus gallus ENSGALG00000012225 I 0.958
Cirbp Mus musculus ENSMUSG00000045193 I 0.958
XR_020876.1 Pan troglodytes ENSPTRG00000010192 I 0.944
CIRBP Cavia porcellus ENSCPOG00000019403 N 0.944
Q9DED4 Xenopus laevis Q9DED4 I 0.887
BAB19129 Xenopus laevis BAB19129 I 0.887
AAH54250 Xenopus laevis AAH54250 I 0.887
cirbp Xenopus tropicalis ENSXETG00000003281 I 0.859
AAG09816 Xenopus laevis AAG09816 N 0.831
BAA31861 Xenopus laevis BAA31861 N 0.831
AAH41204 Xenopus laevis AAH41204 N 0.831
O93235 Xenopus laevis O93235 N 0.831
cirbp Danio rerio ENSDARG00000013351 N 0.761
zgc:112425 Danio rerio ENSDARG00000042049 N 0.746
RBM3 Anolis carolinensis ENSACAG00000013718 I 0.732
Ame_R005750 Ailuropoda melanoleuca Ame_R005750 I 0.718
Rbm3 Rattus norvegicus ENSRNOG00000005387 I 0.718
RBM3 Pteropus vampyrus ENSPVAG00000015630 I 0.718
Rbm3 Mus musculus ENSMUSG00000031167 I 0.718
RBM3 Loxodonta africana ENSLAFG00000007003 I 0.718
LOC100051736 Equus caballus ENSECAG00000024257 I 0.718
RBM3 Felis catus ENSFCAG00000002245 I 0.718
Rbm3 Dipodomys ordii ENSDORG00000000182 I 0.718
RBM3 Cavia porcellus ENSCPOG00000003553 I 0.718
XM_549003.1 Canis familiaris ENSCAFG00000016002 I 0.704
ENSCAFG00000023295 Canis familiaris ENSCAFG00000023295 I 0.704
ENSOCUG00000002271 Oryctolagus cuniculus ENSOCUG00000002271 I 0.704
RBM3 Gorilla gorilla ENSGGOG00000005864 I 0.704
XR_023694.1 Pan troglodytes ENSPTRG00000021864 I 0.704
RBM3 Tursiops truncatus ENSTTRG00000008587 I 0.704
RBM3 Homo sapiens ENSG00000102317 D 0.704
ENSPPYG00000020314 Pongo pygmaeus ENSPPYG00000020314 I 0.704