Cirbp (Mus musculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMUSG00000045193 T39364_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM3
M048_0.6 		Homo sapiens RADACKA RNAcompete
Ray et al.(2013)
RNCMPT00050 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000052642 RRM 8 78
ENSMUSP00000101004 RRM 8 78
ENSMUSP00000121214 RRM 8 78

Links

Other RRM family RBPs
Other Mus musculus RBPs

53 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cirbp Rattus norvegicus ENSRNOG00000015999 I 1.000
CIRBP Canis familiaris ENSCAFG00000019506 I 0.986
CIRBP Anolis carolinensis ENSACAG00000000441 I 0.986
Ame_R011907 Ailuropoda melanoleuca Ame_R011907 I 0.986
LOC100394350 Callithrix jacchus ENSCJAG00000005504 I 0.986
CIRBP Homo sapiens ENSG00000099622 I 0.986
LOC706175 Macaca mulatta ENSMMUG00000022101 I 0.986
CIRBP Meleagris gallopavo ENSMGAG00000010253 I 0.986
CIRBP Loxodonta africana ENSLAFG00000032156 I 0.986
CIRBP Gorilla gorilla ENSGGOG00000002338 I 0.986
CIRBP Tursiops truncatus ENSTTRG00000011049 I 0.986
Q3SZN4_BOVIN Bos taurus ENSBTAG00000007480 I 0.986
CIRBP Sus scrofa ENSSSCG00000013427 I 0.986
CIRBP Ornithorhynchus anatinus ENSOANG00000012230 I 0.986
CIRBP Taeniopygia guttata ENSTGUG00000000884 I 0.986
CIRBP Pteropus vampyrus ENSPVAG00000005629 I 0.986
CIRBP Felis catus ENSFCAG00000013724 I 0.972
CIRBP Monodelphis domestica ENSMODG00000005290 I 0.972
Q45KQ2_CHICK Gallus gallus ENSGALG00000012225 I 0.972
CIRBP Microcebus murinus ENSMICG00000015962 I 0.958
XR_020876.1 Pan troglodytes ENSPTRG00000010192 I 0.958
CIRBP Cavia porcellus ENSCPOG00000019403 N 0.930
BAB19129 Xenopus laevis BAB19129 I 0.901
Q9DED4 Xenopus laevis Q9DED4 I 0.901
AAH54250 Xenopus laevis AAH54250 I 0.901
AAG09816 Xenopus laevis AAG09816 N 0.859
O93235 Xenopus laevis O93235 N 0.859
BAA31861 Xenopus laevis BAA31861 N 0.859
AAH41204 Xenopus laevis AAH41204 N 0.859
cirbp Xenopus tropicalis ENSXETG00000003281 I 0.845
LOC100051736 Equus caballus ENSECAG00000024257 I 0.761
RBM3 Loxodonta africana ENSLAFG00000007003 I 0.761
Rbm3 Mus musculus ENSMUSG00000031167 I 0.761
RBM3 Felis catus ENSFCAG00000002245 I 0.761
Rbm3 Dipodomys ordii ENSDORG00000000182 I 0.761
RBM3 Anolis carolinensis ENSACAG00000013718 I 0.761
Ame_R005750 Ailuropoda melanoleuca Ame_R005750 I 0.761
Rbm3 Rattus norvegicus ENSRNOG00000005387 I 0.761
RBM3 Pteropus vampyrus ENSPVAG00000015630 I 0.761
RBM3 Cavia porcellus ENSCPOG00000003553 I 0.761
ENSOCUG00000002271 Oryctolagus cuniculus ENSOCUG00000002271 I 0.746
RBM3 Tursiops truncatus ENSTTRG00000008587 I 0.746
ENSPPYG00000020314 Pongo pygmaeus ENSPPYG00000020314 I 0.746
cirbp Danio rerio ENSDARG00000013351 N 0.746
XM_549003.1 Canis familiaris ENSCAFG00000016002 I 0.746
ENSCAFG00000023295 Canis familiaris ENSCAFG00000023295 I 0.746
XR_023694.1 Pan troglodytes ENSPTRG00000021864 I 0.746
zgc:112425 Danio rerio ENSDARG00000042049 N 0.746
RBM3 Gorilla gorilla ENSGGOG00000005864 I 0.746
RBM3 Homo sapiens ENSG00000102317 D 0.746
ENSCAFG00000015485 Canis familiaris ENSCAFG00000015485 I 0.732
RBM3 Choloepus hoffmanni ENSCHOG00000007642 I 0.718