ENSRNOG00000030425 (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000030425 T41206_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.737
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.737
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000040384 RRM 228 292
ENSRNOP00000040384 RRM 302 365

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.737
SFPQ Microcebus murinus ENSMICG00000011755 I 0.737
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.737
SFPQ Homo sapiens ENSG00000116560 D 0.737
SFPQ Spermophilus tridecemlineatus ENSSTOG00000014004 I 0.737
Sfpq Mus musculus ENSMUSG00000028820 I 0.737
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.737
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.737
Sfpq Rattus norvegicus ENSRNOG00000013154 I 0.737
ENSPPYG00000001560 Pongo pygmaeus ENSPPYG00000001560 I 0.737
SFPQ Procavia capensis ENSPCAG00000006164 I 0.737
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.737
LOC100069588 Equus caballus ENSECAG00000000642 I 0.737
SFPQ Echinops telfairi ENSETEG00000001095 I 0.737
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.737
SFPQ Bos taurus ENSBTAG00000016328 I 0.737
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.737
Ame_R005060 Ailuropoda melanoleuca Ame_R005060 I 0.737
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.737
XM_532566.2 Canis familiaris ENSCAFG00000018271 I 0.737
LOC100386194 Callithrix jacchus ENSCJAG00000001431 I 0.737
SFPQ Cavia porcellus ENSCPOG00000015018 I 0.737
ENSACAG00000013307 Anolis carolinensis ENSACAG00000013307 I 0.735
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.729
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.720
ENSMODG00000017937 Monodelphis domestica ENSMODG00000017937 I 0.714
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.714
Q91017_CHICK Gallus gallus ENSGALG00000002514 I 0.712
SFPQ Taeniopygia guttata ENSTGUG00000001722 I 0.712
ENSOANG00000008789 Ornithorhynchus anatinus ENSOANG00000008789 I 0.707