ENSACAG00000013307 (Anolis carolinensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSACAG00000013307 T34710_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.962
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.962
NONO
M309_0.6 		Homo sapiens Sequence logo not available GAGAGGAAC SELEX
Cook et al.(2011)
490_12403470 		0.742
NONO
M307_0.6 		Homo sapiens AGGGA SELEX
Cook et al.(2011)
488_9001221 		0.742
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000013130 RRM 31 95
ENSACAP00000013130 RRM 105 171

Links

Other RRM family RBPs
Other Anolis carolinensis RBPs

104 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SFPQ Pan troglodytes ENSPTRG00000000518 I 0.962
SFPQ Gorilla gorilla ENSGGOG00000026354 I 0.962
SFPQ Homo sapiens ENSG00000116560 D 0.962
Sfpq Rattus norvegicus ENSRNOG00000013154 I 0.962
LOC100069588 Equus caballus ENSECAG00000000642 I 0.962
SFPQ Spermophilus tridecemlineatus ENSSTOG00000014004 I 0.962
ENSPPYG00000001560 Pongo pygmaeus ENSPPYG00000001560 I 0.962
SFPQ Procavia capensis ENSPCAG00000006164 I 0.962
SFPQ Oryctolagus cuniculus ENSOCUG00000001877 I 0.962
Sfpq Mus musculus ENSMUSG00000028820 I 0.962
SFPQ Microcebus murinus ENSMICG00000011755 I 0.962
SFPQ Ochotona princeps ENSOPRG00000013696 I 0.962
SFPQ Loxodonta africana ENSLAFG00000015951 I 0.962
SFPQ Cavia porcellus ENSCPOG00000015018 I 0.962
SFPQ Echinops telfairi ENSETEG00000001095 I 0.962
LOC100386194 Callithrix jacchus ENSCJAG00000001431 I 0.962
Ame_R005060 Ailuropoda melanoleuca Ame_R005060 I 0.962
SFPQ Bos taurus ENSBTAG00000016328 I 0.962
SFPQ Vicugna pacos ENSVPAG00000006960 I 0.962
SFPQ Tursiops truncatus ENSTTRG00000013930 I 0.962
ENSCAFG00000003595 Canis familiaris ENSCAFG00000003595 I 0.962
Q91017_CHICK Gallus gallus ENSGALG00000002514 I 0.947
SFPQ Taeniopygia guttata ENSTGUG00000001722 I 0.947
XM_532566.2 Canis familiaris ENSCAFG00000018271 I 0.940
ENSMEUG00000014082 Macropus eugenii ENSMEUG00000014082 I 0.940
ENSMODG00000017937 Monodelphis domestica ENSMODG00000017937 I 0.940
Sfpq Dipodomys ordii ENSDORG00000008109 I 0.932
ENSOANG00000008789 Ornithorhynchus anatinus ENSOANG00000008789 I 0.932
SFPQ Tupaia belangeri ENSTBEG00000006238 I 0.917
ENSTSYG00000009311 Tarsius syrichta ENSTSYG00000009311 I 0.917
SFPQ Pteropus vampyrus ENSPVAG00000001865 I 0.895
ENSCAFG00000017608 Canis familiaris ENSCAFG00000017608 I 0.879
sfpq Xenopus tropicalis ENSXETG00000009682 I 0.879
ENSTNIG00000011331 Tetraodon nigroviridis ENSTNIG00000011331 I 0.856
ENSTRUG00000003783 Takifugu rubripes ENSTRUG00000003783 I 0.848
ENSGACG00000002034 Gasterosteus aculeatus ENSGACG00000002034 I 0.820
ENSORLG00000007459 Oryzias latipes ENSORLG00000007459 I 0.818
ENSCJAG00000035318 Callithrix jacchus ENSCJAG00000035318 I 0.811
sfpq Danio rerio ENSDARG00000011564 I 0.803
SFPQ Macaca mulatta ENSMMUG00000019154 I 0.795
ENSMGAG00000004237 Meleagris gallopavo ENSMGAG00000004237 I 0.750
SFPQ Choloepus hoffmanni ENSCHOG00000009131 I 0.744
Ame_R017809 Ailuropoda melanoleuca Ame_R017809 I 0.742
Nono Mus musculus ENSMUSG00000031311 I 0.742
ENSOCUG00000021848 Oryctolagus cuniculus ENSOCUG00000021848 I 0.742
XR_025068.1 Pan troglodytes ENSPTRG00000022010 I 0.742
NONO Vicugna pacos ENSVPAG00000002272 I 0.742
NONO Tursiops truncatus ENSTTRG00000009605 I 0.742
Nono Rattus norvegicus ENSRNOG00000003689 I 0.742
NONO Pteropus vampyrus ENSPVAG00000016503 I 0.742
NONO Procavia capensis ENSPCAG00000002541 I 0.742
ENSPPYG00000020451 Pongo pygmaeus ENSPPYG00000020451 I 0.742
NONO Otolemur garnettii ENSOGAG00000004834 I 0.742
LOC697263 Macaca mulatta ENSMMUG00000020481 I 0.742
ENSCPOG00000010263 Cavia porcellus ENSCPOG00000010263 I 0.742
NONO Microcebus murinus ENSMICG00000000232 I 0.742
NONO Erinaceus europaeus ENSEEUG00000014404 I 0.742
NONO Loxodonta africana ENSLAFG00000013422 I 0.742
NONO Gorilla gorilla ENSGGOG00000006194 I 0.742
NONO Homo sapiens ENSG00000147140 D 0.742
TAF1 Callithrix jacchus ENSCJAG00000013390 I 0.742
ENSCAFG00000017071 Canis familiaris ENSCAFG00000017071 I 0.742
NONO Equus caballus ENSECAG00000008502 I 0.742
LOC607081 Canis familiaris ENSCAFG00000003207 I 0.742
Q2KJ42_BOVIN Bos taurus ENSBTAG00000012152 I 0.742
ENSRNOG00000030425 Rattus norvegicus ENSRNOG00000030425 I 0.735
PSPC1_CHICK Gallus gallus ENSGALG00000017142 I 0.735
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.735
NONO Sorex araneus ENSSARG00000007959 I 0.735
ENSCPOG00000023605 Cavia porcellus ENSCPOG00000023605 I 0.735
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.735
NONO Monodelphis domestica ENSMODG00000004445 I 0.735
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.735
NONO Spermophilus tridecemlineatus ENSSTOG00000015869 I 0.729
NONO Macropus eugenii ENSMEUG00000004294 I 0.729
PSPC1_BOVIN Bos taurus ENSBTAG00000003934 I 0.727
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.727
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.727
ENSCJAG00000003136 Callithrix jacchus ENSCJAG00000003136 I 0.727
NONO Meleagris gallopavo ENSMGAG00000008869 I 0.727
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.727
NONO Taeniopygia guttata ENSTGUG00000007048 I 0.727
Q5ZIZ5_CHICK Gallus gallus ENSGALG00000005507 I 0.727
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.720
Ame_R014248 Ailuropoda melanoleuca Ame_R014248 I 0.720
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.720
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.720
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.720
NONO Myotis lucifugus ENSMLUG00000002489 I 0.720
PSPC1 Macropus eugenii ENSMEUG00000000476 I 0.720
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.720
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.720
Pspc1 Mus musculus ENSMUSG00000021938 I 0.720
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.720
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.720
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.720
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.720
PSPC1 Sorex araneus ENSSARG00000000888 I 0.720
ENSPPYG00000005186 Pongo pygmaeus ENSPPYG00000005186 I 0.720
PSPC1 Homo sapiens ENSG00000121390 I 0.720
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.720
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.712
AAH45128 Xenopus laevis AAH45128 I 0.705
BAE54372 Xenopus laevis BAE54372 I 0.705