CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSSARG00000004448
(
Sorex araneus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSARG00000004448
T41298_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000004032
RRM
36
104
IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF
ENSSARP00000004032
RRM
128
197
VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY
ENSSARP00000004032
RRM
231
265
LYVKNLDDGIDDERLRKEFSPFGTITSAKXXXXXX
Links
Other
RRM
family RBPs
Other
Sorex araneus
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSETEG00000002793
Echinops telfairi
ENSETEG00000002793
N
0.994
PABPC4
Felis catus
ENSFCAG00000015254
N
0.845
Q2VIP1_9PRIM
Gorilla gorilla
ENSGGOG00000006785
I
0.808
ENSCPOG00000012917
Cavia porcellus
ENSCPOG00000012917
N
0.808
ENSVPAG00000003865
Vicugna pacos
ENSVPAG00000003865
N
0.808
Q5ZL53_CHICK
Gallus gallus
ENSGALG00000014450
N
0.803
ENSMGAG00000012239
Meleagris gallopavo
ENSMGAG00000012239
N
0.799
ENSEEUG00000002701
Erinaceus europaeus
ENSEEUG00000002701
N
0.760
ENSDNOG00000008718
Dasypus novemcinctus
ENSDNOG00000008718
N
0.755