Q2VIP1_9PRIM (Gorilla gorilla)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGGOG00000006785 T37808_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC1
M146_0.6 		Homo sapiens ARAAAAM RNAcompete
Ray et al.(2013)
RNCMPT00155 		0.852
PABPC1
M349_0.6 		Homo sapiens ACDAAYM SELEX
Cook et al.(2011)
950_7908267 		0.852
PABPC1
M275_0.6 		Homo sapiens AAAAA SELEX
Cook et al.(2011)
24_7908267 		0.852
PABPC3
M144_0.6 		Homo sapiens RAAAACM RNAcompete
Ray et al.(2013)
RNCMPT00153 		0.816
PABPC4
M042_0.6 		Homo sapiens AAAAAAR RNAcompete
Ray et al.(2013)
RNCMPT00043 		0.735
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000006641 RRM 36 104
ENSGGOP00000006641 RRM 128 197
ENSGGOP00000006641 RRM 231 299
ENSGGOP00000023191 RRM 13 84
ENSGGOP00000023191 RRM 102 170
ENSGGOP00000023191 RRM 194 263
ENSGGOP00000023191 RRM 297 365

Links

Other RRM family RBPs
Other Gorilla gorilla RBPs

98 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSVPAG00000003865 Vicugna pacos ENSVPAG00000003865 N 1.000
ENSCPOG00000012917 Cavia porcellus ENSCPOG00000012917 N 1.000
Q5ZL53_CHICK Gallus gallus ENSGALG00000014450 N 0.995
ENSMGAG00000012239 Meleagris gallopavo ENSMGAG00000012239 N 0.990
ENSEEUG00000002701 Erinaceus europaeus ENSEEUG00000002701 N 0.952
ENSDNOG00000008718 Dasypus novemcinctus ENSDNOG00000008718 N 0.947
ENSMGAG00000005408 Meleagris gallopavo ENSMGAG00000005408 N 0.865
PABPC4 Pteropus vampyrus ENSPVAG00000002187 N 0.861
Pabpc1 Dipodomys ordii ENSDORG00000013935 N 0.861
D4AC21_RAT Rattus norvegicus ENSRNOG00000015642 I 0.851
PABPC4 Sorex araneus ENSSARG00000000310 N 0.851
PABPC4 Choloepus hoffmanni ENSCHOG00000005327 N 0.851
Pabpc4 Mus musculus ENSMUSG00000011257 I 0.846
PABPC1 Homo sapiens ENSG00000070756 D 0.817
PABPC1 Macaca mulatta ENSMMUG00000017786 I 0.817
ENSLAFG00000013994 Loxodonta africana ENSLAFG00000013994 I 0.817
ENSSSCG00000006063 Sus scrofa ENSSSCG00000006063 I 0.817
ENSOCUG00000004354 Oryctolagus cuniculus ENSOCUG00000004354 I 0.817
ENSOCUG00000023935 Oryctolagus cuniculus ENSOCUG00000023935 I 0.817
ENSPVAG00000016640 Pteropus vampyrus ENSPVAG00000016640 I 0.817
ENSCAFG00000000567 Canis familiaris ENSCAFG00000000567 I 0.817
ENSPPYG00000018790 Pongo pygmaeus ENSPPYG00000018790 I 0.817
LOC100413032 Callithrix jacchus ENSCJAG00000015833 I 0.817
ENSTTRG00000004689 Tursiops truncatus ENSTTRG00000004689 I 0.817
ENSOPRG00000009667 Ochotona princeps ENSOPRG00000009667 I 0.817
XR_023909.1 Pan troglodytes ENSPTRG00000020475 I 0.813
ENSACAG00000016470 Anolis carolinensis ENSACAG00000016470 I 0.813
ENSTSYG00000004229 Tarsius syrichta ENSTSYG00000004229 I 0.813
Pabpc1 Rattus norvegicus ENSRNOG00000008639 I 0.813
PABPC1 Taeniopygia guttata ENSTGUG00000012067 I 0.813
Pabpc1 Mus musculus ENSMUSG00000022283 I 0.813
ENSOANG00000007307 Ornithorhynchus anatinus ENSOANG00000007307 I 0.813
XR_030308.1 Monodelphis domestica ENSMODG00000006222 I 0.810
ENSSARG00000004448 Sorex araneus ENSSARG00000004448 N 0.808
ENSETEG00000002793 Echinops telfairi ENSETEG00000002793 N 0.803
Ame_R001741 Ailuropoda melanoleuca Ame_R001741 I 0.799
LOC100411130 Callithrix jacchus ENSCJAG00000018953 I 0.792
pabpc1 Xenopus tropicalis ENSXETG00000006635 I 0.785
ENSPPYG00000005219 Pongo pygmaeus ENSPPYG00000005219 I 0.785
PABPC3 Macaca mulatta ENSMMUG00000020835 I 0.782
PABPC3 Homo sapiens ENSG00000151846 D 0.782
LOC100056021 Equus caballus ENSECAG00000020699 I 0.782
Pabpc3 Rattus norvegicus ENSRNOG00000017367 I 0.775
Q2VIP2_PANTR Pan troglodytes ENSPTRG00000022593 I 0.775
pabpc1a Danio rerio ENSDARG00000017219 I 0.771
AAH52100 Xenopus laevis AAH52100 I 0.771
P20965 Xenopus laevis P20965 I 0.771
XM_001367383.1 Monodelphis domestica ENSMODG00000017105 I 0.771
CAA40721 Xenopus laevis CAA40721 I 0.771
ENSSTOG00000016395 Spermophilus tridecemlineatus ENSSTOG00000016395 N 0.769
Pabpc6 Mus musculus ENSMUSG00000046173 I 0.768
AAA60936 Xenopus laevis AAA60936 I 0.768
PABPC3 Oryzias latipes ENSORLG00000002691 I 0.768
AAI08463 Xenopus laevis AAI08463 I 0.764
Q6IP09 Xenopus laevis Q6IP09 I 0.764
AAH72110 Xenopus laevis AAH72110 I 0.764
PABPC3 Takifugu rubripes ENSTRUG00000011577 I 0.764
PABPC3 Gasterosteus aculeatus ENSGACG00000003572 I 0.764
pabpc1b Danio rerio ENSDARG00000021140 I 0.761
ENSTNIG00000009153 Tetraodon nigroviridis ENSTNIG00000009153 I 0.761
ENSTRUG00000003767 Takifugu rubripes ENSTRUG00000003767 I 0.761
Pabpc2 Mus musculus ENSMUSG00000051732 I 0.754
Pabpc2 Rattus norvegicus ENSRNOG00000014527 I 0.750
ENSGACG00000003771 Gasterosteus aculeatus ENSGACG00000003771 I 0.746
ENSORLG00000003008 Oryzias latipes ENSORLG00000003008 I 0.746
PABPC3 Tetraodon nigroviridis ENSTNIG00000013307 I 0.745
ENSMODG00000012040 Monodelphis domestica ENSMODG00000012040 I 0.736
AAH73435 Xenopus laevis AAH73435 I 0.722
PABPC4 Taeniopygia guttata ENSTGUG00000001266 I 0.718
PABPC4 Oryctolagus cuniculus ENSOCUG00000000562 I 0.715
PABPC4 Gallus gallus ENSGALG00000003800 I 0.715
PABPC4 Macaca mulatta ENSMMUG00000007497 I 0.711
LOC100054235 Equus caballus ENSECAG00000009396 I 0.711
ENSOANG00000010001 Ornithorhynchus anatinus ENSOANG00000010001 I 0.711
ENSMICG00000000431 Microcebus murinus ENSMICG00000000431 I 0.711
PABPC4 Loxodonta africana ENSLAFG00000000151 I 0.711
PABPC4 Ochotona princeps ENSOPRG00000011984 I 0.711
PABPC4 Sus scrofa ENSSSCG00000003660 I 0.711
PABPC4 Canis familiaris ENSCAFG00000003081 I 0.711
PABPC4 Cavia porcellus ENSCPOG00000009552 I 0.711
A4IFC3_BOVIN Bos taurus ENSBTAG00000017125 I 0.711
XM_001365232.1 Monodelphis domestica ENSMODG00000017657 I 0.709
PABPC4 Gorilla gorilla ENSGGOG00000004002 I 0.708
PABPC4 Homo sapiens ENSG00000090621 D 0.708
A6MKJ4_CALJA Callithrix jacchus ENSCJAG00000002512 I 0.708
ENSPPYG00000001506 Pongo pygmaeus ENSPPYG00000001506 I 0.708
PABPC4 Pan troglodytes ENSPTRG00000000573 I 0.708
ENSACAG00000002544 Anolis carolinensis ENSACAG00000002544 I 0.708
ENSMLUG00000012245 Myotis lucifugus ENSMLUG00000012245 I 0.707
PABPC4 Erinaceus europaeus ENSEEUG00000002962 I 0.704
pabpc4 Danio rerio ENSDARG00000059259 I 0.704
Gm10110 Mus musculus ENSMUSG00000062093 I 0.704
PABPC1L Meleagris gallopavo ENSMGAG00000003674 I 0.701
PABPC4 Tetraodon nigroviridis ENSTNIG00000016902 I 0.701
PABPC4 Oryzias latipes ENSORLG00000017479 I 0.701
Q8QGJ7_FUGRU Takifugu rubripes ENSTRUG00000005907 I 0.701
XM_001373066.1 Monodelphis domestica ENSMODG00000013156 I 0.701
PABPC4 Gasterosteus aculeatus ENSGACG00000007179 I 0.701