PSPC1 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000010358 T42081_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000004096 RRM 77 141
ENSTNIP00000004096 RRM 151 215
ENSTNIP00000013264 RRM 87 151
ENSTNIP00000013264 RRM 161 225

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PSPC1 Takifugu rubripes ENSTRUG00000011335 N 0.908
PSPC1 Gasterosteus aculeatus ENSGACG00000014901 N 0.815
PSPC1 Oryzias latipes ENSORLG00000004232 N 0.815
pspc1 Danio rerio ENSDARG00000006621 N 0.762
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.718
PSPC1_CHICK Gallus gallus ENSGALG00000017142 I 0.718
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.718
Pspc1 Mus musculus ENSMUSG00000021938 I 0.715
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.715
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.715
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.715
ENSPPYG00000005186 Pongo pygmaeus ENSPPYG00000005186 I 0.715
PSPC1 Sorex araneus ENSSARG00000000888 I 0.715
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.715
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.715
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.715
PSPC1 Macropus eugenii ENSMEUG00000000476 I 0.715
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.715
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.715
PSPC1 Homo sapiens ENSG00000121390 I 0.715
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.715
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.715
Ame_R014248 Ailuropoda melanoleuca Ame_R014248 I 0.715
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.708
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.708
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.708
PSPC1_BOVIN Bos taurus ENSBTAG00000003934 I 0.708
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.708
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.705
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.700