PSPC1 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000004232 T40115_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000005300 RRM 38 102
ENSORLP00000005300 RRM 112 176

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PSPC1 Gasterosteus aculeatus ENSGACG00000014901 N 0.823
PSPC1 Takifugu rubripes ENSTRUG00000011335 N 0.823
PSPC1 Tetraodon nigroviridis ENSTNIG00000010358 N 0.815
pspc1 Danio rerio ENSDARG00000006621 N 0.762
PSPC1_CHICK Gallus gallus ENSGALG00000017142 I 0.748
PSPC1 Anolis carolinensis ENSACAG00000002093 I 0.748
PSPC1 Taeniopygia guttata ENSTGUG00000011295 I 0.748
PSPC1 Homo sapiens ENSG00000121390 I 0.738
PSPC1 Oryctolagus cuniculus ENSOCUG00000006153 I 0.738
PSPC1 Loxodonta africana ENSLAFG00000010968 I 0.738
Pspc1 Mus musculus ENSMUSG00000021938 I 0.738
PSPC1 Macaca mulatta ENSMMUG00000020262 I 0.738
PSPC1 Myotis lucifugus ENSMLUG00000017663 I 0.738
PSPC1 Monodelphis domestica ENSMODG00000008029 I 0.738
PSPC1 Macropus eugenii ENSMEUG00000000476 I 0.738
PSPC1 Cavia porcellus ENSCPOG00000000395 I 0.738
ENSPPYG00000005186 Pongo pygmaeus ENSPPYG00000005186 I 0.738
Ame_R014248 Ailuropoda melanoleuca Ame_R014248 I 0.738
PSPC1 Sorex araneus ENSSARG00000000888 I 0.738
Pspc1 Rattus norvegicus ENSRNOG00000020782 I 0.738
PSPC1 Choloepus hoffmanni ENSCHOG00000008913 I 0.738
PSPC1 Callithrix jacchus ENSCJAG00000004554 I 0.738
PSPC1 Pan troglodytes ENSPTRG00000005677 I 0.738
Pspc1 Dipodomys ordii ENSDORG00000016050 I 0.731
PSPC1 Sus scrofa ENSSSCG00000009569 I 0.731
PSPC1 Tursiops truncatus ENSTTRG00000003343 I 0.731
PSPC1_BOVIN Bos taurus ENSBTAG00000003934 I 0.731
PSPC1 Pteropus vampyrus ENSPVAG00000005036 I 0.731
PSPC1 Gorilla gorilla ENSGGOG00000003414 I 0.727
PSPC1 Erinaceus europaeus ENSEEUG00000011288 I 0.723
PSPC1 Felis catus ENSFCAG00000013701 I 0.708