CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM34
(
Tursiops truncatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTTRG00000002216
T42545_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTTRP00000002076
RRM
185
232
VFVGNLPVTCNKNKLKSFFKEYGQIESVRFRSLIPAEGILSKKLAAIK
ENSTTRP00000002076
RRM
226
272
KKLAAIKRKIHPDQKNINAYVVFKDESAATKALERNGAQIADGFRVR
ENSTTRP00000002076
RRM
287
338
VFVGNLPYKAEESAVEKHFLDCGNTVAVRIVRDQVTGASRGFGYVLFEXXXX
ENSTTRP00000016571
RRM
180
227
VFVGNLPVTCNKNKLKSFFKEYGQIESVRFRSLIPAEGILSKKLAAIK
ENSTTRP00000016571
RRM
221
267
KKLAAIKRKIHPDQKNINAYVVFKDESAATKALERNGAQIADGFRVR
ENSTTRP00000016571
RRM
282
333
VFVGNLPYKAEESAVEKHFLDCGNTVAVRIVRDQVTGASRGFGYVLFEXXXX
Links
Other
RRM
family RBPs
Other
Tursiops truncatus
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM34
Sus scrofa
ENSSSCG00000010157
N
0.806
A8NJ74_BOVIN
Bos taurus
ENSBTAG00000000221
N
0.802
Ame_R015227
Ailuropoda melanoleuca
Ame_R015227
N
0.794
RBM34
Loxodonta africana
ENSLAFG00000014289
N
0.794
A6MKB3_CALJA
Callithrix jacchus
ENSCJAG00000018125
N
0.782
ARID4B
Macaca mulatta
ENSMMUG00000007141
N
0.782
RBM34
Pan troglodytes
ENSPTRG00000032432
N
0.776
RBM34
Felis catus
ENSFCAG00000001852
N
0.776
RBM34
Oryctolagus cuniculus
ENSOCUG00000009173
N
0.771
RBM34
Homo sapiens
ENSG00000188739
N
0.770
RBM34
Gorilla gorilla
ENSGGOG00000007924
N
0.758
LOC100146167
Equus caballus
ENSECAG00000013333
N
0.758
RBM34
Pteropus vampyrus
ENSPVAG00000015158
N
0.749
RBM34
Myotis lucifugus
ENSMLUG00000016224
N
0.745
Rbm34
Dipodomys ordii
ENSDORG00000006420
N
0.741
RBM34
Cavia porcellus
ENSCPOG00000015213
N
0.733
Rbm34
Mus musculus
ENSMUSG00000033931
N
0.727
Rbm34
Rattus norvegicus
ENSRNOG00000020004
N
0.709