CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM34
(
Oryctolagus cuniculus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOCUG00000009173
T39666_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000007917
RRM
191
238
VFVGNLPVTCNKKKLKSFFKEYGPIESVRFRSLIPAEGTLSKKLAAIK
ENSOCUP00000007917
RRM
231
278
SKKLAAIKRKIHPDQKNINAYVVFKDQSAATKALERNGTHIADGFRIR
ENSOCUP00000007917
RRM
293
362
VFVGNLPYKVEETAVEEHFLDCGNIVAVRIVRDQITGIGKGFGYVLFENKDSVHLALKLNNSELMGRKLR
Links
Other
RRM
family RBPs
Other
Oryctolagus cuniculus
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
A6MKB3_CALJA
Callithrix jacchus
ENSCJAG00000018125
N
0.916
RBM34
Loxodonta africana
ENSLAFG00000014289
N
0.910
RBM34
Pan troglodytes
ENSPTRG00000032432
N
0.910
Ame_R015227
Ailuropoda melanoleuca
Ame_R015227
N
0.910
RBM34
Homo sapiens
ENSG00000188739
N
0.904
RBM34
Gorilla gorilla
ENSGGOG00000007924
N
0.904
ARID4B
Macaca mulatta
ENSMMUG00000007141
N
0.904
RBM34
Sus scrofa
ENSSSCG00000010157
N
0.904
A8NJ74_BOVIN
Bos taurus
ENSBTAG00000000221
N
0.898
RBM34
Felis catus
ENSFCAG00000001852
N
0.898
RBM34
Myotis lucifugus
ENSMLUG00000016224
N
0.886
Rbm34
Dipodomys ordii
ENSDORG00000006420
N
0.880
LOC100146167
Equus caballus
ENSECAG00000013333
N
0.880
RBM34
Cavia porcellus
ENSCPOG00000015213
N
0.880
RBM34
Pteropus vampyrus
ENSPVAG00000015158
N
0.868
Rbm34
Mus musculus
ENSMUSG00000033931
N
0.843
Rbm34
Rattus norvegicus
ENSRNOG00000020004
N
0.831
RBM34
Ornithorhynchus anatinus
ENSOANG00000001206
N
0.819
RBM34
Tursiops truncatus
ENSTTRG00000002216
N
0.771
D3ZPK9_RAT
Rattus norvegicus
ENSRNOG00000023341
N
0.746
RBM34
Monodelphis domestica
ENSMODG00000008436
N
0.740