CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GF18875
(
Drosophila ananassae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0095889
T43272_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0122067
RRM
166
236
IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSRSIR
FBpp0122067
RRM
270
337
VYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPVK
Links
Other
RRM
family RBPs
Other
Drosophila ananassae
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GJ22768
Drosophila virilis
FBgn0209872
N
1.000
GG11588
Drosophila erecta
FBgn0103885
N
1.000
GE23777
Drosophila yakuba
FBgn0240933
N
1.000
CG34362
Drosophila melanogaster
FBgn0085391
N
1.000
GD21364
Drosophila simulans
FBgn0192801
N
1.000
GM16370
Drosophila sechellia
FBgn0171285
N
1.000
GI22766
Drosophila mojavensis
FBgn0145493
N
1.000
GL23648
Drosophila persimilis
FBgn0161238
N
0.993
GA26680-RA
Drosophila pseudoobscura
FBgn0248053
N
0.993
GH17439
Drosophila grimshawi
FBgn0124909
N
0.986
GK22641
Drosophila willistoni
FBgn0224618
N
0.978
CG34354
Drosophila melanogaster
FBgn0085383
N
0.835
GJ22770
Drosophila virilis
FBgn0209874
N
0.835
GD21365
Drosophila simulans
FBgn0192802
N
0.835
PHUM511750
Pediculus humanus
PHUM511750
N
0.784
AGAP005292
Anopheles gambiae
AGAP005292
N
0.784
DGIL_AUG5s2018g1t1
Acyrtosiphon pisum
DGIL_AUG5s2018g1t1
N
0.748