CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
GM16370
(
Drosophila sechellia
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0171285
T43827_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0197847
RRM
167
237
IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAMNGQWLGSRSIR
FBpp0197847
RRM
271
338
VYVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPVK
Links
Other
RRM
family RBPs
Other
Drosophila sechellia
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GE23777
Drosophila yakuba
FBgn0240933
N
1.000
GI22766
Drosophila mojavensis
FBgn0145493
N
1.000
CG34362
Drosophila melanogaster
FBgn0085391
N
1.000
GF18875
Drosophila ananassae
FBgn0095889
N
1.000
GG11588
Drosophila erecta
FBgn0103885
N
1.000
GJ22768
Drosophila virilis
FBgn0209872
N
1.000
GD21364
Drosophila simulans
FBgn0192801
N
1.000
GA26680-RA
Drosophila pseudoobscura
FBgn0248053
N
0.993
GL23648
Drosophila persimilis
FBgn0161238
N
0.993
GH17439
Drosophila grimshawi
FBgn0124909
N
0.986
GK22641
Drosophila willistoni
FBgn0224618
N
0.978
GD21365
Drosophila simulans
FBgn0192802
N
0.835
CG34354
Drosophila melanogaster
FBgn0085383
N
0.835
GJ22770
Drosophila virilis
FBgn0209874
N
0.835
PHUM511750
Pediculus humanus
PHUM511750
N
0.784
AGAP005292
Anopheles gambiae
AGAP005292
N
0.784
DGIL_AUG5s2018g1t1
Acyrtosiphon pisum
DGIL_AUG5s2018g1t1
N
0.748