GM15444 (Drosophila sechellia)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0170362 T43820_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SF2
M064_0.6 		Drosophila melanogaster DGGAGGA RNAcompete
Ray et al.(2013)
RNCMPT00066 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0196921 RRM 9 75
FBpp0196921 RRM 117 195

Links

Other RRM family RBPs
Other Drosophila sechellia RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GG20059 Drosophila erecta FBgn0112258 I 1.000
SF2 Drosophila melanogaster FBgn0040284 D 1.000
GJ23504 Drosophila virilis FBgn0210602 I 0.993
GI24651 Drosophila mojavensis FBgn0147373 I 0.993
GE26323 Drosophila yakuba FBgn0243353 I 0.897
GA20008-RA Drosophila pseudoobscura FBgn0080004 I 0.890
GF16525 Drosophila ananassae FBgn0093546 I 0.890
GH18077 Drosophila grimshawi FBgn0125545 I 0.890
GL22249 Drosophila persimilis FBgn0159841 I 0.890
GK13511 Drosophila willistoni FBgn0215519 I 0.890
AAEL006473 Aedes aegypti AAEL006473 I 0.884
CPIJ008786 Culex quinquefasciatus CPIJ008786 I 0.863
AGAP010496 Anopheles gambiae AGAP010496 I 0.863
CpipJ_CPIJ008786 Culex pipiens CpipJ_CPIJ008786 I 0.863
BGIBMGA013096 Bombyx mori BGIBMGA013096 I 0.842
nasonia_NCBI_hmm519234 Nasonia vitripennis nasonia_NCBI_hmm519234 I 0.822
amel4_ncbi_hmm5595 Apis mellifera amel4_ncbi_hmm5595 I 0.808
DGIL_AUG5s14011g9t1 Acyrtosiphon pisum DGIL_AUG5s14011g9t1 I 0.801
e_gw1.83.149.1 Daphnia pulex e_gw1.83.149.1 I 0.788
ISCW014398 Ixodes scapularis ISCW014398 I 0.781