CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GD19352
(
Drosophila simulans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0190854
T43974_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0217754
RRM
195
263
VRISNLSESMTETDLEELVKKIGPHTKMYLAREKNSGLCKGFAYVHFKFRQDAAAAIEVLNGHGYDHLI
Links
Other
RRM
family RBPs
Other
Drosophila simulans
RBPs
33 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GM23111
Drosophila sechellia
FBgn0177979
N
1.000
CG10881
Drosophila melanogaster
FBgn0038796
N
1.000
GE11159
Drosophila yakuba
FBgn0228983
N
0.971
GF23028
Drosophila ananassae
FBgn0100022
N
0.971
GE25664
Drosophila yakuba
FBgn0242726
N
0.971
GG23911
Drosophila erecta
FBgn0116050
N
0.971
GK22449
Drosophila willistoni
FBgn0224426
N
0.957
GL23467
Drosophila persimilis
FBgn0161057
N
0.942
GA10616-RA
Drosophila pseudoobscura
FBgn0070673
N
0.942
GI22232
Drosophila mojavensis
FBgn0144960
N
0.914
GJ23035
Drosophila virilis
FBgn0210137
N
0.900
GH14150
Drosophila grimshawi
FBgn0121626
N
0.886
GG12605
Drosophila erecta
FBgn0104893
N
0.857
GI16065
Drosophila mojavensis
FBgn0138814
N
0.857
GE16936
Drosophila yakuba
FBgn0234424
N
0.857
GF21942
Drosophila ananassae
FBgn0098942
N
0.857
GH17624
Drosophila grimshawi
FBgn0125094
N
0.857
GH17626
Drosophila grimshawi
FBgn0125096
N
0.857
GA21226-RA
Drosophila pseudoobscura
FBgn0081214
N
0.857
GL12937
Drosophila persimilis
FBgn0150543
N
0.857
GK16326
Drosophila willistoni
FBgn0218328
N
0.857
GJ15710
Drosophila virilis
FBgn0202898
N
0.857
CG8636
Drosophila melanogaster
FBgn0029629
N
0.857
GH21559
Drosophila grimshawi
FBgn0129021
N
0.857
GD24609
Drosophila simulans
FBgn0195937
N
0.857
GM18870
Drosophila sechellia
FBgn0173773
N
0.857
CpipJ_CPIJ000190
Culex pipiens
CpipJ_CPIJ000190
N
0.829
EIF3G_AEDAE
Aedes aegypti
AAEL006851
N
0.829
EIF3G_AEDAE
Aedes aegypti
AAEL012661
N
0.829
EIF3G_CULQU
Culex quinquefasciatus
CPIJ000190
N
0.829
CPIJ015350
Culex quinquefasciatus
CPIJ015350
N
0.800
CpipJ_CPIJ015350
Culex pipiens
CpipJ_CPIJ015350
N
0.800
EIF3G_ANOGA
Anopheles gambiae
AGAP007668
N
0.786