CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GE25664
(
Drosophila yakuba
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0242726
T44370_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0270674
RRM
195
263
VRISNLSESMTEADLEELVKKIGPHTKMYLAREKNTGLCKGFAYVHFKFRQDAAAAIEVLNGHGYDHLI
Links
Other
RRM
family RBPs
Other
Drosophila yakuba
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GG23911
Drosophila erecta
FBgn0116050
N
1.000
GE11159
Drosophila yakuba
FBgn0228983
N
1.000
GM23111
Drosophila sechellia
FBgn0177979
N
0.971
GL23467
Drosophila persimilis
FBgn0161057
N
0.971
GD19352
Drosophila simulans
FBgn0190854
N
0.971
GA10616-RA
Drosophila pseudoobscura
FBgn0070673
N
0.971
GF23028
Drosophila ananassae
FBgn0100022
N
0.971
GK22449
Drosophila willistoni
FBgn0224426
N
0.971
CG10881
Drosophila melanogaster
FBgn0038796
N
0.971
GI22232
Drosophila mojavensis
FBgn0144960
N
0.900
GH21559
Drosophila grimshawi
FBgn0129021
N
0.886
GL12937
Drosophila persimilis
FBgn0150543
N
0.886
GI16065
Drosophila mojavensis
FBgn0138814
N
0.886
GM18870
Drosophila sechellia
FBgn0173773
N
0.886
GA21226-RA
Drosophila pseudoobscura
FBgn0081214
N
0.886
GJ23035
Drosophila virilis
FBgn0210137
N
0.886
GK16326
Drosophila willistoni
FBgn0218328
N
0.886
GE16936
Drosophila yakuba
FBgn0234424
N
0.886
GJ15710
Drosophila virilis
FBgn0202898
N
0.886
GD24609
Drosophila simulans
FBgn0195937
N
0.886
GF21942
Drosophila ananassae
FBgn0098942
N
0.886
CG8636
Drosophila melanogaster
FBgn0029629
N
0.886
GG12605
Drosophila erecta
FBgn0104893
N
0.886
GH14150
Drosophila grimshawi
FBgn0121626
N
0.871
GH17626
Drosophila grimshawi
FBgn0125096
N
0.871
GH17624
Drosophila grimshawi
FBgn0125094
N
0.871
EIF3G_AEDAE
Aedes aegypti
AAEL012661
N
0.857
EIF3G_AEDAE
Aedes aegypti
AAEL006851
N
0.857
EIF3G_CULQU
Culex quinquefasciatus
CPIJ000190
N
0.857
CpipJ_CPIJ000190
Culex pipiens
CpipJ_CPIJ000190
N
0.857
CPIJ015350
Culex quinquefasciatus
CPIJ015350
N
0.829
CpipJ_CPIJ015350
Culex pipiens
CpipJ_CPIJ015350
N
0.829
EIF3G_ANOGA
Anopheles gambiae
AGAP007668
N
0.814
nasonia_NCBI_hmm600384
Nasonia vitripennis
nasonia_NCBI_hmm600384
N
0.714