CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GL23467
(
Drosophila persimilis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0161057
T43755_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0187574
RRM
198
266
VRISNLSESMTEADLEELVKKIGPHTKLYLAREKNTGLCKGFAYVHFKFRQDAAAAIEILNGHGYDHLI
Links
Other
RRM
family RBPs
Other
Drosophila persimilis
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GA10616-RA
Drosophila pseudoobscura
FBgn0070673
N
1.000
GE25664
Drosophila yakuba
FBgn0242726
N
0.971
GG23911
Drosophila erecta
FBgn0116050
N
0.971
GE11159
Drosophila yakuba
FBgn0228983
N
0.971
GK22449
Drosophila willistoni
FBgn0224426
N
0.971
GF23028
Drosophila ananassae
FBgn0100022
N
0.971
CG10881
Drosophila melanogaster
FBgn0038796
N
0.942
GD19352
Drosophila simulans
FBgn0190854
N
0.942
GM23111
Drosophila sechellia
FBgn0177979
N
0.942
GI22232
Drosophila mojavensis
FBgn0144960
N
0.900
GM18870
Drosophila sechellia
FBgn0173773
N
0.886
CG8636
Drosophila melanogaster
FBgn0029629
N
0.886
GG12605
Drosophila erecta
FBgn0104893
N
0.886
GA21226-RA
Drosophila pseudoobscura
FBgn0081214
N
0.886
GF21942
Drosophila ananassae
FBgn0098942
N
0.886
GH21559
Drosophila grimshawi
FBgn0129021
N
0.886
GK16326
Drosophila willistoni
FBgn0218328
N
0.886
GJ23035
Drosophila virilis
FBgn0210137
N
0.886
GJ15710
Drosophila virilis
FBgn0202898
N
0.886
GD24609
Drosophila simulans
FBgn0195937
N
0.886
GE16936
Drosophila yakuba
FBgn0234424
N
0.886
GI16065
Drosophila mojavensis
FBgn0138814
N
0.886
GL12937
Drosophila persimilis
FBgn0150543
N
0.886
GH17626
Drosophila grimshawi
FBgn0125096
N
0.871
GH17624
Drosophila grimshawi
FBgn0125094
N
0.871
GH14150
Drosophila grimshawi
FBgn0121626
N
0.843
EIF3G_AEDAE
Aedes aegypti
AAEL012661
N
0.843
CpipJ_CPIJ000190
Culex pipiens
CpipJ_CPIJ000190
N
0.843
EIF3G_AEDAE
Aedes aegypti
AAEL006851
N
0.843
EIF3G_CULQU
Culex quinquefasciatus
CPIJ000190
N
0.843
CpipJ_CPIJ015350
Culex pipiens
CpipJ_CPIJ015350
N
0.814
CPIJ015350
Culex quinquefasciatus
CPIJ015350
N
0.814
EIF3G_ANOGA
Anopheles gambiae
AGAP007668
N
0.786
nasonia_NCBI_hmm600384
Nasonia vitripennis
nasonia_NCBI_hmm600384
N
0.729