CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GL12937
(
Drosophila persimilis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0150543
T43696_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0177044
RRM
190
259
IRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCKGFAYVHFKQRKDAAAAIEILNGHGYDHLIL
Links
Other
RRM
family RBPs
Other
Drosophila persimilis
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GE16936
Drosophila yakuba
FBgn0234424
N
1.000
GF21942
Drosophila ananassae
FBgn0098942
N
1.000
GA21226-RA
Drosophila pseudoobscura
FBgn0081214
N
1.000
CG8636
Drosophila melanogaster
FBgn0029629
N
1.000
GG12605
Drosophila erecta
FBgn0104893
N
1.000
GK16326
Drosophila willistoni
FBgn0218328
N
1.000
GI16065
Drosophila mojavensis
FBgn0138814
N
1.000
GM18870
Drosophila sechellia
FBgn0173773
N
1.000
GH21559
Drosophila grimshawi
FBgn0129021
N
1.000
GD24609
Drosophila simulans
FBgn0195937
N
1.000
GJ15710
Drosophila virilis
FBgn0202898
N
1.000
GH17626
Drosophila grimshawi
FBgn0125096
N
0.986
GH17624
Drosophila grimshawi
FBgn0125094
N
0.986
EIF3G_CULQU
Culex quinquefasciatus
CPIJ000190
N
0.900
EIF3G_AEDAE
Aedes aegypti
AAEL012661
N
0.900
EIF3G_AEDAE
Aedes aegypti
AAEL006851
N
0.900
CpipJ_CPIJ000190
Culex pipiens
CpipJ_CPIJ000190
N
0.900
GF23028
Drosophila ananassae
FBgn0100022
N
0.886
GE25664
Drosophila yakuba
FBgn0242726
N
0.886
GE11159
Drosophila yakuba
FBgn0228983
N
0.886
GG23911
Drosophila erecta
FBgn0116050
N
0.886
GJ23035
Drosophila virilis
FBgn0210137
N
0.886
GK22449
Drosophila willistoni
FBgn0224426
N
0.886
GI22232
Drosophila mojavensis
FBgn0144960
N
0.886
GA10616-RA
Drosophila pseudoobscura
FBgn0070673
N
0.886
GL23467
Drosophila persimilis
FBgn0161057
N
0.886
CPIJ015350
Culex quinquefasciatus
CPIJ015350
N
0.871
CpipJ_CPIJ015350
Culex pipiens
CpipJ_CPIJ015350
N
0.871
GD19352
Drosophila simulans
FBgn0190854
N
0.857
CG10881
Drosophila melanogaster
FBgn0038796
N
0.857
GM23111
Drosophila sechellia
FBgn0177979
N
0.857
GH14150
Drosophila grimshawi
FBgn0121626
N
0.843
EIF3G_ANOGA
Anopheles gambiae
AGAP007668
N
0.814
nasonia_NCBI_hmm600384
Nasonia vitripennis
nasonia_NCBI_hmm600384
N
0.729
amel4_ncbi_hmm3734
Apis mellifera
amel4_ncbi_hmm3734
N
0.729
PHUM467340
Pediculus humanus
PHUM467340
N
0.700