XM_002863704.1 (Arabidopsis lyrata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.C_scaffold_8000474 T44476_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_8000474 RRM 93 162
fgenesh1_pm.C_scaffold_8000474 RRM 186 257
fgenesh1_pm.C_scaffold_8000474 RRM 272 333

Links

Other RRM family RBPs
Other Arabidopsis lyrata RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002891318.1 Arabidopsis lyrata fgenesh2_kg.1__3846__AT1G47500.1 N 0.786
ATRBP47C Arabidopsis thaliana AT1G47490-TAIR-G N 0.761
Medtr3g148180 Medicago truncatula Medtr3g148180 I 0.722
Cucsa.123510 Cucumis sativus Cucsa.123510 I 0.714
B9MVK8_POPTR Populus trichocarpa POPTR_0014s03390 I 0.713
ppa005903m Prunus persica ppa005903m I 0.713
MDP0000200455 Malus x domestica MDP0000200455 I 0.708
Glyma17g36330.1 Glycine max Glyma17g36330.1 I 0.708
MDP0000136330 Malus x domestica MDP0000136330 I 0.708
Glyma04g03950.1 Glycine max Glyma04g03950.1 I 0.703