nasonia_NCBI_hmm256414 (Nasonia vitripennis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 nasonia_NCBI_hmm256414 T32184_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG17838
M123_0.6 		Drosophila melanogaster BAAAUUD RNAcompete
Ray et al.(2013)
RNCMPT00131 		0.862
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm256414 RRM 166 236
nasonia_NCBI_hmm256414 RRM 247 314
nasonia_NCBI_hmm256414 RRM 342 404

Links

Other RRM family RBPs
Other Nasonia vitripennis RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm4283 Apis mellifera amel4_ncbi_hmm4283 I 0.916
AAEL002879 Aedes aegypti AAEL002879 I 0.891
AGAP001419 Anopheles gambiae AGAP001419 I 0.886
GA27045-RA Drosophila pseudoobscura FBgn0248416 I 0.881
GM23135 Drosophila sechellia FBgn0178003 I 0.876
GG24121 Drosophila erecta FBgn0116260 I 0.876
CG17838 Drosophila melanogaster FBgn0038826 D 0.876
GF16693 Drosophila ananassae FBgn0093714 I 0.876
GE25686 Drosophila yakuba FBgn0242747 I 0.876
GK22469 Drosophila willistoni FBgn0224446 I 0.871
GJ22950 Drosophila virilis FBgn0210053 I 0.861
GI10594 Drosophila mojavensis FBgn0133358 I 0.861
PHUM268060 Pediculus humanus PHUM268060 I 0.847
GH17270 Drosophila grimshawi FBgn0124740 I 0.787
ISCW004858 Ixodes scapularis ISCW004858 I 0.772
NCBI_GNO_2900131 Daphnia pulex NCBI_GNO_2900131 I 0.718
DGIL_AUG5s13678g2t1 Acyrtosiphon pisum DGIL_AUG5s13678g2t1 N 0.704