PHUM268060 (Pediculus humanus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PHUM268060 T45338_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG17838
M123_0.6 		Drosophila melanogaster BAAAUUD RNAcompete
Ray et al.(2013)
RNCMPT00131 		0.814
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PHUM268060-PA RRM 179 250
PHUM268060-PA RRM 260 327
PHUM268060-PA RRM 355 417

Links

Other RRM family RBPs
Other Pediculus humanus RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm4283 Apis mellifera amel4_ncbi_hmm4283 I 0.862
nasonia_NCBI_hmm256414 Nasonia vitripennis nasonia_NCBI_hmm256414 I 0.847
AAEL002879 Aedes aegypti AAEL002879 I 0.842
GM23135 Drosophila sechellia FBgn0178003 I 0.828
GE25686 Drosophila yakuba FBgn0242747 I 0.828
GF16693 Drosophila ananassae FBgn0093714 I 0.828
GG24121 Drosophila erecta FBgn0116260 I 0.828
CG17838 Drosophila melanogaster FBgn0038826 D 0.828
AGAP001419 Anopheles gambiae AGAP001419 I 0.828
GA27045-RA Drosophila pseudoobscura FBgn0248416 I 0.823
GK22469 Drosophila willistoni FBgn0224446 I 0.813
GJ22950 Drosophila virilis FBgn0210053 I 0.813
GI10594 Drosophila mojavensis FBgn0133358 I 0.813
GH17270 Drosophila grimshawi FBgn0124740 I 0.759
ISCW004858 Ixodes scapularis ISCW004858 I 0.754
NCBI_GNO_2900131 Daphnia pulex NCBI_GNO_2900131 I 0.748
DGIL_AUG5s13678g2t1 Acyrtosiphon pisum DGIL_AUG5s13678g2t1 N 0.714