GA27045-RA (Drosophila pseudoobscura)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0248416 T44407_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG17838
M123_0.6 		Drosophila melanogaster BAAAUUD RNAcompete
Ray et al.(2013)
RNCMPT00131 		0.966
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0283449 RRM 169 239
FBpp0283449 RRM 250 317
FBpp0283449 RRM 345 407

Links

Other RRM family RBPs
Other Drosophila pseudoobscura RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GG24121 Drosophila erecta FBgn0116260 I 0.980
GM23135 Drosophila sechellia FBgn0178003 I 0.980
GE25686 Drosophila yakuba FBgn0242747 I 0.980
GF16693 Drosophila ananassae FBgn0093714 I 0.980
CG17838 Drosophila melanogaster FBgn0038826 D 0.980
GI10594 Drosophila mojavensis FBgn0133358 I 0.975
GJ22950 Drosophila virilis FBgn0210053 I 0.975
GK22469 Drosophila willistoni FBgn0224446 I 0.975
AAEL002879 Aedes aegypti AAEL002879 I 0.886
GH17270 Drosophila grimshawi FBgn0124740 I 0.881
nasonia_NCBI_hmm256414 Nasonia vitripennis nasonia_NCBI_hmm256414 I 0.881
AGAP001419 Anopheles gambiae AGAP001419 I 0.881
amel4_ncbi_hmm4283 Apis mellifera amel4_ncbi_hmm4283 I 0.862
PHUM268060 Pediculus humanus PHUM268060 I 0.823
ISCW004858 Ixodes scapularis ISCW004858 I 0.762
NCBI_GNO_2900131 Daphnia pulex NCBI_GNO_2900131 I 0.728