Ppa-uaf-1 (Pristionchus pacificus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PPA25373 T45838_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PPA25373 RRM 147 172
PPA25373 RRM 176 221
PPA25373 RRM 254 323
PPA25373 RRM 381 442

Links

Other RRM family RBPs
Other Pristionchus pacificus RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
WUBG_04401 Wuchereria bancrofti WUBG_04401 N 0.844
Bm1_09760 Brugia malayi Bm1_09760 N 0.844
uaf-1 Caenorhabditis elegans Y92C3B.2 N 0.838
CBN25972 Caenorhabditis brenneri CBN25972 N 0.831
CRE16190 Caenorhabditis remanei CRE16190 N 0.831
Minc05098 Meloidogyne incognita Minc05098 N 0.771
e_gw.526.41.1 Branchiostoma floridae e_gw.526.41.1 N 0.746
estExt_fgenesh2_pm.C_220017 Branchiostoma floridae estExt_fgenesh2_pm.C_220017 N 0.743