uaf-1 (Caenorhabditis elegans)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Y92C3B.2 T46324_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Y92C3B.2a RRM 186 211
Y92C3B.2a RRM 216 260
Y92C3B.2a RRM 293 362
Y92C3B.2a RRM 421 482
Y92C3B.2b.1 RRM 68 129
Y92C3B.2b.2 RRM 68 129
Y92C3B.2b.3 RRM 68 129
Y92C3B.2c RRM 164 189
Y92C3B.2c RRM 194 238
Y92C3B.2c RRM 271 340
Y92C3B.2c RRM 399 460
Y92C3B.2d RRM 161 186
Y92C3B.2d RRM 191 235
Y92C3B.2d RRM 268 337
Y92C3B.2d RRM 396 457

Links

Other RRM family RBPs
Other Caenorhabditis elegans RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBN25972 Caenorhabditis brenneri CBN25972 N 0.971
CRE16190 Caenorhabditis remanei CRE16190 N 0.956
Ppa-uaf-1 Pristionchus pacificus PPA25373 N 0.838
WUBG_04401 Wuchereria bancrofti WUBG_04401 N 0.820
Bm1_09760 Brugia malayi Bm1_09760 N 0.820
Minc05098 Meloidogyne incognita Minc05098 N 0.776
LOAG_09095 Loa loa LOAG_09095 N 0.742
e_gw.526.41.1 Branchiostoma floridae e_gw.526.41.1 N 0.737
estExt_fgenesh2_pm.C_220017 Branchiostoma floridae estExt_fgenesh2_pm.C_220017 N 0.733