SNAPOd2T00024835001 (Oikopleura dioica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SNAPOd2T00024835001 T48452_0.6 Genoscope (2013-Jan-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00024835001 RRM 9 79

Links

Other RRM family RBPs
Other Oikopleura dioica RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PPIE Monodelphis domestica ENSMODG00000017659 N 0.732
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.732
PPIE Gallus gallus ENSGALG00000013383 N 0.732
Ppie Mus musculus ENSMUSG00000028651 N 0.718
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.718
PPIE Macaca mulatta ENSMMUG00000018869 N 0.718
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.718
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.718
PPIE Pan troglodytes ENSPTRG00000000577 N 0.718
PPIE Sus scrofa ENSSSCG00000003664 N 0.718
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.718
PPIE Sorex araneus ENSSARG00000005703 N 0.718
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.718
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.718
PPIE Loxodonta africana ENSLAFG00000028312 N 0.718
PPIE Microcebus murinus ENSMICG00000016676 N 0.718
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.718
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.718
PPIE Canis familiaris ENSCAFG00000003031 N 0.718
LOC100054084 Equus caballus ENSECAG00000008955 N 0.718
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.718
LOC100054282 Equus caballus ENSECAG00000024285 N 0.718
PPIE Homo sapiens ENSG00000084072 N 0.718
PPIE Cavia porcellus ENSCPOG00000007365 N 0.708
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.704
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.704
AAI23372 Xenopus laevis AAI23372 N 0.704
PPIE Anolis carolinensis ENSACAG00000002688 N 0.704
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.704
ppie Danio rerio ENSDARG00000059270 N 0.704
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.704
PPIE Oryzias latipes ENSORLG00000017469 N 0.704
PPIE Felis catus ENSFCAG00000006027 N 0.704