estExt_fgenesh1_pg.C_1440043 (Physcomitrella patens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_1440043 T50496_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_1440043 RRM 8 69
estExt_fgenesh1_pg.C_1440043 RRM 102 165

Links

Other RRM family RBPs
Other Physcomitrella patens RBPs

20 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.5.1267.1 Selaginella moellendorfii e_gw1.5.1267.1 N 0.833
cassava31733.valid.m1 Manihot esculenta cassava31733.valid.m1 N 0.762
cassava31732.valid.m1 Manihot esculenta cassava31732.valid.m1 N 0.762
PDK_20s1467051g001 Phoenix dactylifera PDK_20s1467051g001 N 0.754
B9I4G0_POPTR Populus trichocarpa POPTR_0012s13920 N 0.746
B9ID09_POPTR Populus trichocarpa POPTR_0015s13880 N 0.746
LOC_Os02g03040 Oryza sativa LOC_Os02g03040 N 0.730
Glyma10g38400.1 Glycine max Glyma10g38400.1 N 0.730
BGIOSIBCE005422 Oryza indica BGIOSIBCE005422 N 0.730
Medtr1g129430 Medicago truncatula Medtr1g129430 N 0.730
Glyma20g29460.1 Glycine max Glyma20g29460.1 N 0.730
PK24775.1 Cannabis sativa PK24775.1 N 0.730
ppa005993m Prunus persica ppa005993m N 0.730
B9GPU7_POPTR Populus trichocarpa POPTR_0002s15490 N 0.722
MDP0000288452 Malus x domestica MDP0000288452 N 0.722
XM_002864102.1 Arabidopsis lyrata fgenesh2_kg.8__1091__AT5G52040.2 N 0.714
LjT39A22.50.nd Lotus japonicus LjT39A22.50.nd N 0.714
Cucsa.042460 Cucumis sativus Cucsa.042460 N 0.711
XM_002869624.1 Arabidopsis lyrata fgenesh2_kg.7__1711__AT4G25500.1 N 0.706
RS41 Arabidopsis thaliana AT5G52040-TAIR-G N 0.706