Glyma10g38400.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma10g38400.1 T52777_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma10g38400.1 RRM 78 139
Glyma10g38400.1 RRM 171 234

Links

Other RRM family RBPs
Other Glycine max RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma20g29460.1 Glycine max Glyma20g29460.1 N 1.000
LjT39A22.50.nd Lotus japonicus LjT39A22.50.nd N 0.944
Medtr1g129430 Medicago truncatula Medtr1g129430 N 0.921
ppa005993m Prunus persica ppa005993m N 0.905
MDP0000288452 Malus x domestica MDP0000288452 N 0.897
cassava31733.valid.m1 Manihot esculenta cassava31733.valid.m1 N 0.881
cassava31732.valid.m1 Manihot esculenta cassava31732.valid.m1 N 0.881
PK24775.1 Cannabis sativa PK24775.1 N 0.873
Cucsa.042460 Cucumis sativus Cucsa.042460 N 0.867
B9ID09_POPTR Populus trichocarpa POPTR_0015s13880 N 0.865
B9I4G0_POPTR Populus trichocarpa POPTR_0012s13920 N 0.857
mgf011722m Mimulus guttatus mgf011722m N 0.833
B9GPU7_POPTR Populus trichocarpa POPTR_0002s15490 N 0.825
B9IC71_POPTR Populus trichocarpa POPTR_0014s07270 N 0.817
PDK_20s1467051g001 Phoenix dactylifera PDK_20s1467051g001 N 0.817
XM_002864102.1 Arabidopsis lyrata fgenesh2_kg.8__1091__AT5G52040.2 N 0.810
XM_002869624.1 Arabidopsis lyrata fgenesh2_kg.7__1711__AT4G25500.1 N 0.810
RS40 Arabidopsis thaliana AT4G25500-TAIR-G N 0.802
RS41 Arabidopsis thaliana AT5G52040-TAIR-G N 0.802
ppa008562m Prunus persica ppa008562m N 0.766
BGIOSIBCE005422 Oryza indica BGIOSIBCE005422 N 0.762
LOC_Os02g03040 Oryza sativa LOC_Os02g03040 N 0.762
MDP0000583927 Malus x domestica MDP0000583927 N 0.758
mgf013695m Mimulus guttatus mgf013695m N 0.750
mgf016209m Mimulus guttatus mgf016209m N 0.750
PK11625.1 Cannabis sativa PK11625.1 N 0.750
e_gw1.5.1267.1 Selaginella moellendorfii e_gw1.5.1267.1 N 0.746
Glyma03g01920.1 Glycine max Glyma03g01920.1 N 0.744
BRADI3G02227 Brachypodium distachyon BRADI3G02227 N 0.738
estExt_fgenesh1_pg.C_1440043 Physcomitrella patens estExt_fgenesh1_pg.C_1440043 N 0.730
Glyma07g05900.1 Glycine max Glyma07g05900.1 N 0.717
Glyma16g02500.1 Glycine max Glyma16g02500.1 N 0.709
Cucsa.259460 Cucumis sativus Cucsa.259460 N 0.701