fgenesh1_kg.7_#_199_#_2561_2_CCWO_CCWP_EXTA (Myceliophthora thermophila)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_kg.7_#_199_#_2561_2_CCWO_CCWP_EXTA T51738_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_kg.7_#_199_#_2561_2_CCWO_CCWP_EXTA RRM 72 142

Links

Other RRM family RBPs
Other Myceliophthora thermophila RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_kg.C_60127 Thielavia terrestris estExt_fgenesh2_kg.C_60127 N 0.901
Pa_3_8710 Podospora anserina Pa_3_8710 N 0.887
MGG_06668 Magnaporthe oryzae MGG_06668 N 0.859
CHGG_07888 Chaetomium globosum CHGG_07888 N 0.859
estExt_fgenesh3_kg.C_110041 Neurospora discreta estExt_fgenesh3_kg.C_110041 N 0.817
estExt_Genewise1Plus.C_130242 Neurospora tetrasperma estExt_Genewise1Plus.C_130242 N 0.817
NCU01793 Neurospora crassa NCU01793 N 0.817
FVEG_11504 Fusarium verticillioides FVEG_11504 N 0.746
VDAG_08864 Verticillium dahliae VDAG_08864 N 0.732
VDBG_05239 Verticillium albo atrum VDBG_05239 N 0.732
GLRG_05141 Colletotrichum graminicola GLRG_05141 N 0.704
FGSG_10830 Fusarium graminearum FGSG_10830 N 0.704
fgenesh5_pg.C_scaffold_21000102 Trichoderma reesei fgenesh5_pg.C_scaffold_21000102 N 0.704