NCBI_GNO_2900131 (Daphnia pulex)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 NCBI_GNO_2900131 T53820_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG17838
M123_0.6 		Drosophila melanogaster BAAAUUD RNAcompete
Ray et al.(2013)
RNCMPT00131 		0.714
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
NCBI_GNO_2900131 RRM 177 248
NCBI_GNO_2900131 RRM 258 328
NCBI_GNO_2900131 RRM 353 415

Links

Other RRM family RBPs
Other Daphnia pulex RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PHUM268060 Pediculus humanus PHUM268060 I 0.748
amel4_ncbi_hmm4283 Apis mellifera amel4_ncbi_hmm4283 I 0.738
GI10594 Drosophila mojavensis FBgn0133358 I 0.728
GJ22950 Drosophila virilis FBgn0210053 I 0.728
GA27045-RA Drosophila pseudoobscura FBgn0248416 I 0.728
AAEL002879 Aedes aegypti AAEL002879 I 0.723
GF16693 Drosophila ananassae FBgn0093714 I 0.723
AGAP001419 Anopheles gambiae AGAP001419 I 0.723
GK22469 Drosophila willistoni FBgn0224446 I 0.718
GE25686 Drosophila yakuba FBgn0242747 I 0.718
GG24121 Drosophila erecta FBgn0116260 I 0.718
nasonia_NCBI_hmm256414 Nasonia vitripennis nasonia_NCBI_hmm256414 I 0.718
CG17838 Drosophila melanogaster FBgn0038826 D 0.718
GM23135 Drosophila sechellia FBgn0178003 I 0.718