s_462942 (Phytophthora sojae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 s_462942 T53923_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_462942 RRM 14 84
s_462942 RRM 101 172

Links

Other RRM family RBPs
Other Phytophthora sojae RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_00387 Phytophthora capsici estExt_Genewise1Plus.C_00387 N 0.958
PITG_15575 Phytophthora infestans PITG_15575 N 0.888
SPRG_10647 Saprolegnia parasitica SPRG_10647 N 0.804
59062 Aureococcus anophagefferens 59062 I 0.769
GSVIVG00018991001 Vitis vinifera GSVIVG00018991001 I 0.741
FER_chlre3.3.376.1.5 Chlamydomonas reinhardtii FER_chlre3.3.376.1.5 I 0.734
MDP0000131129 Malus x domestica MDP0000131129 I 0.727
cassava31033.valid.m1 Manihot esculenta cassava31033.valid.m1 I 0.727
PK08238.1 Cannabis sativa PK08238.1 I 0.727
MDP0000320945 Malus x domestica MDP0000320945 I 0.727
Glyma09g00310.1 Glycine max Glyma09g00310.1 I 0.720
e_gwEuk.5.259.1 Ostreococcus lucimarinus e_gwEuk.5.259.1 I 0.720
gw1.05.00.253.1 Ostreococcus tauri gw1.05.00.253.1 I 0.720
Medtr3g087340 Medicago truncatula Medtr3g087340 I 0.720
Cucsa.251850 Cucumis sativus Cucsa.251850 I 0.720
gw1.5.900.1 Ostreococcus RCC809 gw1.5.900.1 I 0.713
ppa007508m Prunus persica ppa007508m I 0.713
Glyma12g36950.1 Glycine max Glyma12g36950.1 I 0.713
B9HEU6_POPTR Populus trichocarpa POPTR_0007s12570 I 0.713
XM_002886132.1 Arabidopsis lyrata fgenesh2_kg.3__3460__AT2G18510.1 I 0.706
emb2444 Arabidopsis thaliana AT2G18510-TAIR-G I 0.706