BGIBMGA013823 (Bombyx mori)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIBMGA013823 T55058_0.6 SilkDB (2008-Apr-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
fne
M115_0.6 		Drosophila melanogaster UUKDGUU RNAcompete
Ray et al.(2013)
RNCMPT00120 		0.748
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA013823 RRM 20 58
BGIBMGA013823 RRM 62 103
BGIBMGA013823 RRM 119 196
BGIBMGA013823 RRM 272 342

Links

Other RRM family RBPs
Other Bombyx mori RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s1005g4t1 Acyrtosiphon pisum DGIL_AUG5s1005g4t1 I 0.827
PHUM065370 Pediculus humanus PHUM065370 I 0.782
AAEL006675 Aedes aegypti AAEL006675 I 0.771
AGAP009952 Anopheles gambiae AGAP009952 I 0.762
AAEL008516 Aedes aegypti AAEL008516 I 0.761
GF21392 Drosophila ananassae FBgn0098394 I 0.752
GJ16518 Drosophila virilis FBgn0203702 I 0.748
GK25647 Drosophila willistoni FBgn0227606 I 0.748
GA22283-RA Drosophila pseudoobscura FBgn0243690 I 0.748
GL22975 Drosophila persimilis FBgn0160565 I 0.748
GG17743 Drosophila erecta FBgn0109965 I 0.748
fne Drosophila yakuba FBgn0067971 I 0.748
fne Drosophila melanogaster FBgn0086675 D 0.748
GH24423 Drosophila grimshawi FBgn0131879 I 0.748
GI16282 Drosophila mojavensis FBgn0139031 I 0.748
AAEL010567 Aedes aegypti AAEL010567 I 0.745
GM11591 Drosophila sechellia FBgn0166534 I 0.744