GA22283-RA (Drosophila pseudoobscura)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0243690 T44380_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
fne
M115_0.6 		Drosophila melanogaster UUKDGUU RNAcompete
Ray et al.(2013)
RNCMPT00120 		0.987
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0272141 RRM 28 64
FBpp0272141 RRM 70 113
FBpp0272141 RRM 129 197
FBpp0272141 RRM 272 342

Links

Other RRM family RBPs
Other Drosophila pseudoobscura RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GH24423 Drosophila grimshawi FBgn0131879 I 1.000
GG17743 Drosophila erecta FBgn0109965 I 1.000
fne Drosophila melanogaster FBgn0086675 D 1.000
fne Drosophila yakuba FBgn0067971 I 1.000
GI16282 Drosophila mojavensis FBgn0139031 I 1.000
GK25647 Drosophila willistoni FBgn0227606 I 1.000
GL22975 Drosophila persimilis FBgn0160565 I 1.000
GJ16518 Drosophila virilis FBgn0203702 I 1.000
GM11591 Drosophila sechellia FBgn0166534 I 0.995
GF21392 Drosophila ananassae FBgn0098394 I 0.995
DGIL_AUG5s1005g4t1 Acyrtosiphon pisum DGIL_AUG5s1005g4t1 I 0.792
AGAP009952 Anopheles gambiae AGAP009952 I 0.789
PHUM065370 Pediculus humanus PHUM065370 I 0.788
AAEL006675 Aedes aegypti AAEL006675 I 0.788
AAEL008516 Aedes aegypti AAEL008516 I 0.778
AAEL010567 Aedes aegypti AAEL010567 I 0.774
BGIBMGA013823 Bombyx mori BGIBMGA013823 I 0.748
AAH43735 Xenopus laevis AAH43735 I 0.709
Q7SZT7 Xenopus laevis Q7SZT7 I 0.709
AAH56021 Xenopus laevis AAH56021 I 0.709
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.704
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.701