PHUM065370 (Pediculus humanus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PHUM065370 T45316_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
fne
M115_0.6 		Drosophila melanogaster UUKDGUU RNAcompete
Ray et al.(2013)
RNCMPT00120 		0.788
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PHUM065370-PA RRM 43 88
PHUM065370-PA RRM 96 137
PHUM065370-PA RRM 153 222
PHUM065370-PA RRM 292 362

Links

Other RRM family RBPs
Other Pediculus humanus RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL006675 Aedes aegypti AAEL006675 I 0.846
AAEL008516 Aedes aegypti AAEL008516 I 0.843
AGAP009952 Anopheles gambiae AGAP009952 I 0.834
DGIL_AUG5s1005g4t1 Acyrtosiphon pisum DGIL_AUG5s1005g4t1 I 0.824
GF21392 Drosophila ananassae FBgn0098394 I 0.792
AAEL010567 Aedes aegypti AAEL010567 I 0.791
GG17743 Drosophila erecta FBgn0109965 I 0.788
GH24423 Drosophila grimshawi FBgn0131879 I 0.788
GJ16518 Drosophila virilis FBgn0203702 I 0.788
GI16282 Drosophila mojavensis FBgn0139031 I 0.788
fne Drosophila melanogaster FBgn0086675 D 0.788
GL22975 Drosophila persimilis FBgn0160565 I 0.788
GA22283-RA Drosophila pseudoobscura FBgn0243690 I 0.788
fne Drosophila yakuba FBgn0067971 I 0.788
GK25647 Drosophila willistoni FBgn0227606 I 0.788
GM11591 Drosophila sechellia FBgn0166534 I 0.784
BGIBMGA013823 Bombyx mori BGIBMGA013823 I 0.782
AAH43735 Xenopus laevis AAH43735 I 0.717
Q7SZT7 Xenopus laevis Q7SZT7 I 0.717
AAH56021 Xenopus laevis AAH56021 I 0.717
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.713
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.706