Ame_R020019 (Ailuropoda melanoleuca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Ame_R020019 T55663_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.803
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.704
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.704
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R020019 RRM 10 72

Links

Other RRM family RBPs
Other Ailuropoda melanoleuca RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSVPAG00000002726 Vicugna pacos ENSVPAG00000002726 I 0.838
ENSTBEG00000001154 Tupaia belangeri ENSTBEG00000001154 I 0.838
ENSCJAG00000013619 Callithrix jacchus ENSCJAG00000013619 I 0.826
RBMX Homo sapiens ENSG00000147274 D 0.826
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.817
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.803
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.803
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.803
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.803
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.803
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.803
Rbmx Mus musculus ENSMUSG00000031134 I 0.803
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.803
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.803
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.803
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.803
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.803
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.803
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.803
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.803
RBMX Cavia porcellus ENSCPOG00000012164 I 0.803
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.803
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.803
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.803
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.803
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.803
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.803
LOC100054583 Equus caballus ENSECAG00000021380 I 0.803
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.803
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.803
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.792
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.789
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.789
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.789
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.789
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.789
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.789
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.789
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.789
RBMXL1 Homo sapiens ENSG00000213516 I 0.789
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.789
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.775
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.775
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.775
RBMX Pan troglodytes ENSPTRG00000034071 I 0.775
RBMXL2 Homo sapiens ENSG00000170748 I 0.761
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.761
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.761
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.746
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.746
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.746
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.746
AAH70649 Xenopus laevis AAH70649 I 0.746
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.732
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.732
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.732
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.732
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.732
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.732
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.718
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.718
RBMXL3 Tetraodon nigroviridis ENSTNIG00000016844 I 0.704
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.704
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.704
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.704