RBMX (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000012164 T35845_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		1.000
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.803
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.803
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000010937 RRM 10 80

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

83 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 1.000
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 1.000
Rbmx Rattus norvegicus ENSRNOG00000000866 I 1.000
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 1.000
Rbmx Mus musculus ENSMUSG00000031134 I 1.000
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 1.000
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 1.000
RBMX Meleagris gallopavo ENSMGAG00000003594 I 1.000
RBMXL1 Microcebus murinus ENSMICG00000006856 I 1.000
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 1.000
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 1.000
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 1.000
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 1.000
RBMXL1 Sus scrofa ENSSSCG00000012703 I 1.000
RBMX Homo sapiens ENSG00000147274 D 1.000
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 1.000
LOC100054583 Equus caballus ENSECAG00000021380 I 1.000
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 1.000
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 1.000
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 1.000
RBMX Taeniopygia guttata ENSTGUG00000002135 I 1.000
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 1.000
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 1.000
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 1.000
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 1.000
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.986
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.986
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.986
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.986
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.972
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.972
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.972
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.972
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.972
RBMXL1 Homo sapiens ENSG00000213516 I 0.972
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.958
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.958
RBMXL2 Homo sapiens ENSG00000170748 I 0.944
RBMX Pan troglodytes ENSPTRG00000034071 I 0.944
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.944
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.944
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.930
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.930
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.930
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.915
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.915
AAH70649 Xenopus laevis AAH70649 I 0.915
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.901
ENSCJAG00000013619 Callithrix jacchus ENSCJAG00000013619 I 0.901
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.901
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.901
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.887
ENSVPAG00000002726 Vicugna pacos ENSVPAG00000002726 I 0.887
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.887
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.887
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.887
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.887
ENSTBEG00000001154 Tupaia belangeri ENSTBEG00000001154 I 0.887
RBMXL3 Tetraodon nigroviridis ENSTNIG00000016844 I 0.873
RBMX Felis catus ENSFCAG00000004779 I 0.873
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.873
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.873
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.873
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.859
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.845
rbmx Danio rerio ENSDARG00000014244 I 0.831
RBMXL3 Homo sapiens ENSG00000175718 I 0.817
Q52NW1_PANTR Pan troglodytes ENSPTRG00000028822 I 0.803
XR_020119.1 Pan troglodytes ENSPTRG00000028826 I 0.803
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.803
RBMXL3 Gorilla gorilla ENSGGOG00000027260 I 0.803
XR_019934.1 Pan troglodytes ENSPTRG00000032589 I 0.803
ENSPTRG00000032590 Pan troglodytes ENSPTRG00000032590 I 0.803
XR_020159.1 Pan troglodytes ENSPTRG00000032591 I 0.803
Ame_R020019 Ailuropoda melanoleuca Ame_R020019 I 0.803
ENSPTRG00000028821 Pan troglodytes ENSPTRG00000028821 I 0.789
RBMY1E Homo sapiens ENSG00000242389 I 0.789
RBMY1A1 Homo sapiens ENSG00000234414 D 0.789
RBMY1D Homo sapiens ENSG00000244395 I 0.789
RBMY1B Homo sapiens ENSG00000242875 I 0.789
RBMY1F Homo sapiens ENSG00000169800 I 0.775
RBMY1J Homo sapiens ENSG00000226941 I 0.775
RBMXL3 Callithrix jacchus ENSCJAG00000006948 I 0.746