ENSPPYG00000001177 (Pongo pygmaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPPYG00000001177 T40430_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.972
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.803
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.803
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000001363 RRM 10 80
ENSPPYP00000001364 RRM 10 80

Links

Other RRM family RBPs
Other Pongo pygmaeus RBPs

84 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMXL1 Homo sapiens ENSG00000213516 I 1.000
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 1.000
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 1.000
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.972
RBMX Cavia porcellus ENSCPOG00000012164 I 0.972
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.972
LOC100054583 Equus caballus ENSECAG00000021380 I 0.972
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.972
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.972
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.972
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.972
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.972
RBMX Homo sapiens ENSG00000147274 D 0.972
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.972
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.972
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.972
Rbmx Mus musculus ENSMUSG00000031134 I 0.972
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.972
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.972
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.972
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.972
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.972
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.972
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.972
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.972
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.972
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.972
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.972
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.972
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.958
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.958
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.958
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.958
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.944
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.944
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.930
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.930
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.915
RBMXL2 Homo sapiens ENSG00000170748 I 0.915
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.915
RBMX Pan troglodytes ENSPTRG00000034071 I 0.915
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.901
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.901
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.901
AAH70649 Xenopus laevis AAH70649 I 0.887
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.887
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.887
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.887
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.887
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.887
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.873
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.873
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.873
ENSCJAG00000013619 Callithrix jacchus ENSCJAG00000013619 I 0.873
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.859
ENSVPAG00000002726 Vicugna pacos ENSVPAG00000002726 I 0.859
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.859
RBMXL3 Tetraodon nigroviridis ENSTNIG00000016844 I 0.859
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.859
ENSTBEG00000001154 Tupaia belangeri ENSTBEG00000001154 I 0.859
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.859
RBMX Felis catus ENSFCAG00000004779 I 0.845
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.845
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.845
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.831
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.803
Q52NW1_PANTR Pan troglodytes ENSPTRG00000028822 I 0.803
XR_020119.1 Pan troglodytes ENSPTRG00000028826 I 0.803
XR_019934.1 Pan troglodytes ENSPTRG00000032589 I 0.803
XR_020159.1 Pan troglodytes ENSPTRG00000032591 I 0.803
ENSPTRG00000032590 Pan troglodytes ENSPTRG00000032590 I 0.803
rbmx Danio rerio ENSDARG00000014244 I 0.803
RBMXL3 Homo sapiens ENSG00000175718 I 0.789
RBMY1A1 Homo sapiens ENSG00000234414 D 0.789
Ame_R020019 Ailuropoda melanoleuca Ame_R020019 I 0.789
RBMY1E Homo sapiens ENSG00000242389 I 0.789
RBMY1B Homo sapiens ENSG00000242875 I 0.789
RBMY1D Homo sapiens ENSG00000244395 I 0.789
ENSPTRG00000028821 Pan troglodytes ENSPTRG00000028821 I 0.789
RBMY1J Homo sapiens ENSG00000226941 I 0.775
RBMXL3 Gorilla gorilla ENSGGOG00000027260 I 0.775
RBMY1F Homo sapiens ENSG00000169800 I 0.775
RBMXL3 Callithrix jacchus ENSCJAG00000006948 I 0.718