RBMXL1 (Canis familiaris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCAFG00000018962 T35190_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.986
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.792
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.792
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000027996 RRM 10 81

Links

Other RRM family RBPs
Other Canis familiaris RBPs

83 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.986
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.986
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.986
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.986
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.986
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.986
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.986
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.986
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.986
Rbmx Mus musculus ENSMUSG00000031134 I 0.986
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.986
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.986
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.986
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.986
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.986
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.986
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.986
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.986
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.986
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.986
RBMX Homo sapiens ENSG00000147274 D 0.986
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.986
LOC100054583 Equus caballus ENSECAG00000021380 I 0.986
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.986
RBMX Cavia porcellus ENSCPOG00000012164 I 0.986
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.986
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.972
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.972
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.972
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.958
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.958
RBMXL1 Homo sapiens ENSG00000213516 I 0.958
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.958
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.958
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.958
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.944
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.944
RBMX Pan troglodytes ENSPTRG00000034071 I 0.931
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.931
RBMXL2 Homo sapiens ENSG00000170748 I 0.931
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.931
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.917
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.917
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.917
AAH70649 Xenopus laevis AAH70649 I 0.903
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.903
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.903
ENSCJAG00000013619 Callithrix jacchus ENSCJAG00000013619 I 0.889
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.889
RBMXL3 Oryzias latipes ENSORLG00000001692 I 0.889
RBMXL3 Gasterosteus aculeatus ENSGACG00000017237 I 0.889
ENSVPAG00000002726 Vicugna pacos ENSVPAG00000002726 I 0.875
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.875
ENSTBEG00000001154 Tupaia belangeri ENSTBEG00000001154 I 0.875
RBMXL3 Takifugu rubripes ENSTRUG00000006031 I 0.875
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.875
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.875
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.875
RBMXL3 Tetraodon nigroviridis ENSTNIG00000016844 I 0.861
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.861
RBMX Felis catus ENSFCAG00000004779 I 0.861
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.861
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.861
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.847
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.833
rbmx Danio rerio ENSDARG00000014244 I 0.819
RBMXL3 Homo sapiens ENSG00000175718 I 0.806
RBMXL3 Gorilla gorilla ENSGGOG00000027260 I 0.792
XR_020159.1 Pan troglodytes ENSPTRG00000032591 I 0.792
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.792
ENSPTRG00000032590 Pan troglodytes ENSPTRG00000032590 I 0.792
XR_019934.1 Pan troglodytes ENSPTRG00000032589 I 0.792
XR_020119.1 Pan troglodytes ENSPTRG00000028826 I 0.792
Q52NW1_PANTR Pan troglodytes ENSPTRG00000028822 I 0.792
Ame_R020019 Ailuropoda melanoleuca Ame_R020019 I 0.792
RBMY1D Homo sapiens ENSG00000244395 I 0.778
ENSPTRG00000028821 Pan troglodytes ENSPTRG00000028821 I 0.778
RBMY1E Homo sapiens ENSG00000242389 I 0.778
RBMY1A1 Homo sapiens ENSG00000234414 D 0.778
RBMY1B Homo sapiens ENSG00000242875 I 0.778
RBMY1F Homo sapiens ENSG00000169800 I 0.764
RBMY1J Homo sapiens ENSG00000226941 I 0.764
RBMXL3 Callithrix jacchus ENSCJAG00000006948 I 0.736