estExt_fgenesh1_pm.C_20497 (Cryphonectria parasitica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pm.C_20497 T56242_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_20497 RRM 197 265
estExt_fgenesh1_pm.C_20497 RRM 296 349
estExt_fgenesh1_pm.C_20497 RRM 490 546

Links

Other RRM family RBPs
Other Cryphonectria parasitica RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_100357 Neurospora tetrasperma estExt_Genewise1Plus.C_100357 N 0.862
estExt_Genewise1Plus.C_160212 Neurospora discreta estExt_Genewise1Plus.C_160212 N 0.862
Pad-1 Neurospora crassa NCU03491 N 0.862
CHGG_08209 Chaetomium globosum CHGG_08209 N 0.852
Pa_6_4410 Podospora anserina Pa_6_4410 N 0.842
estExt_fgenesh1_pg.C_70696 Myceliophthora thermophila estExt_fgenesh1_pg.C_70696 N 0.842
estExt_fgenesh2_pm.C_60094 Thielavia terrestris estExt_fgenesh2_pm.C_60094 N 0.837
FGSG_05165 Fusarium graminearum FGSG_05165 N 0.832
FVEG_04832 Fusarium verticillioides FVEG_04832 N 0.832
FOXG_07909 Fusarium oxysporum FOXG_07909 N 0.832
estExt_Genewise1Plus.C_sca_3_chr4_2_00461 Nectria haematococca estExt_Genewise1Plus.C_sca_3_chr4_2_00461 N 0.832
estExt_fgenesh5_pg.C_10453 Trichoderma reesei estExt_fgenesh5_pg.C_10453 N 0.816
estExt_Genewise1Plus.C_20716 Trichoderma virens estExt_Genewise1Plus.C_20716 N 0.816
e_gw1.12.188.1 Trichoderma atroviride e_gw1.12.188.1 N 0.816
VDAG_07019 Verticillium dahliae VDAG_07019 N 0.816
SS1G_00444 Sclerotinia sclerotiorum SS1G_00444 N 0.806
BC1G_00662 Botrytis cinerea BC1G_00662 N 0.806
ATEG_05213 Aspergillus terreus CADATEAG00005232 N 0.791
GLRG_08678 Colletotrichum graminicola GLRG_08678 N 0.791
ACLA_019550 Aspergillus clavatus CADACLAG00002508 N 0.786
AFUA_1G15810 Aspergillus fumigatus CADAFUAG00006904 N 0.786
NFIA_009510 Neosartorya fischeri CADNFIAG00001864 N 0.786
e_gw1.00042.124.1 Aspergillus carbonarius e_gw1.00042.124.1 N 0.786
TESG_03203 Trichophyton tonsurans TESG_03203 N 0.786
TEQG_08002 Trichophyton equinum TEQG_08002 N 0.786
MGYG_07158 Microsporum gypseum MGYG_07158 N 0.786
ARB_02131 Arthroderma benhamiae ARB_02131 N 0.786
TERG_08096 Trichophyton rubrum TERG_08096 N 0.786
TRV_02070 Trichophyton verrucosum TRV_02070 N 0.786
An01g14180 Aspergillus niger CADANGAG00001415 N 0.781
AFLA_083600 Aspergillus flavus CADAFLAG00001140 N 0.781
AO090005001118 Aspergillus oryzae CADAORAG00003032 N 0.781
PMAA_065980 Penicillium marneffei PMAA_065980 N 0.781
MCYG_00053 Microsporum canis MCYG_00053 N 0.781
CIMG_03100 Coccidioides immitis CIMG_03100 N 0.776
CPSG_04315 Coccidioides posadasii CPSG_04315 N 0.776
UREG_02855 Uncinocarpus reesii UREG_02855 N 0.776
HCAG_02257 Histoplasma capsulatum HCAG_02257 N 0.776
BDBG_07521 Blastomyces dermatitidis BDBG_07521 N 0.770
PABG_06048 Paracoccidioides brasiliensis PABG_06048 N 0.770
ANIA_00917 Aspergillus nidulans CADANIAG00001739 N 0.760
GSTUMT00004251001 Tuber melanosporum GSTUMT00004251001 N 0.750
Pc16g14480 Penicillium chrysogenum Pc16g14480 N 0.724