CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Minc06529
(
Meloidogyne incognita
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Minc06529
T57805_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc06529
RRM
15
85
VYVGGFGEEVNEKILTLAFIPFGDIVGVSIPLDNETGKHRSFGFVEFELPEDAAAAIDNLDCSEIYGRTIH
Links
Other
RRM
family RBPs
Other
Meloidogyne incognita
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Bm1_52100
Brugia malayi
Bm1_52100
N
0.761
WUBG_08965
Wuchereria bancrofti
WUBG_08965
N
0.761
Ppa-cyn-13
Pristionchus pacificus
PPA01466
N
0.746
LOAG_00807
Loa loa
LOAG_00807
N
0.732
Aqu1.226474
Amphimedon queenslandica
Aqu1.226474
N
0.732
107863
Helobdella robusta
107863
N
0.732
ENSCSAVG00000006547
Ciona savignyi
ENSCSAVG00000006547
N
0.704
AAI23372
Xenopus laevis
AAI23372
N
0.704