107863 (Helobdella robusta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 107863 T48482_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
107863 RRM 8 78

Links

Other RRM family RBPs
Other Helobdella robusta RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PPIE Monodelphis domestica ENSMODG00000017659 N 0.831
PPIE Gallus gallus ENSGALG00000013383 N 0.831
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.831
ISCW002449 Ixodes scapularis ISCW002449 N 0.831
PPIE Macaca mulatta ENSMMUG00000018869 N 0.817
PPIE Homo sapiens ENSG00000084072 N 0.817
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.817
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.817
Ppie Mus musculus ENSMUSG00000028651 N 0.817
PPIE Microcebus murinus ENSMICG00000016676 N 0.817
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.817
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.817
PPIE Loxodonta africana ENSLAFG00000028312 N 0.817
LOC100054282 Equus caballus ENSECAG00000024285 N 0.817
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.817
PPIE Sus scrofa ENSSSCG00000003664 N 0.817
LOC100054084 Equus caballus ENSECAG00000008955 N 0.817
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.817
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.817
AAI23372 Xenopus laevis AAI23372 N 0.817
PPIE Sorex araneus ENSSARG00000005703 N 0.817
PPIE Canis familiaris ENSCAFG00000003031 N 0.817
PPIE Pan troglodytes ENSPTRG00000000577 N 0.817
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.817
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.817
PPIE Cavia porcellus ENSCPOG00000007365 N 0.806
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.803
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.803
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.803
PPIE Oryzias latipes ENSORLG00000017469 N 0.803
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.803
ppie Danio rerio ENSDARG00000059270 N 0.803
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.803
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.803
PPIE Anolis carolinensis ENSACAG00000002688 N 0.803
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.803
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.789
Ame_R020475 Ailuropoda melanoleuca Ame_R020475 N 0.789
ENSPPYG00000001501 Pongo pygmaeus ENSPPYG00000001501 N 0.789
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.789
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.789
PHUM293600 Pediculus humanus PHUM293600 N 0.789
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.775
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.775
PPIE Felis catus ENSFCAG00000006027 N 0.775
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.775
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.746
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.746
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.732
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.732
Minc06529 Meloidogyne incognita Minc06529 N 0.732
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.718
PPIE Spermophilus tridecemlineatus ENSSTOG00000010445 N 0.718
LOAG_00807 Loa loa LOAG_00807 N 0.718
ENSCING00000003116 Ciona intestinalis ENSCING00000003116 N 0.718
PPIE Erinaceus europaeus ENSEEUG00000010232 N 0.718
Bm1_52100 Brugia malayi Bm1_52100 N 0.718
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.718
Aqu1.226474 Amphimedon queenslandica Aqu1.226474 N 0.718
WUBG_08965 Wuchereria bancrofti WUBG_08965 N 0.718
estExt_fgeneshTA2_pm.C_70022 Trichoplax adhaerens estExt_fgeneshTA2_pm.C_70022 N 0.704
AGAP009810 Anopheles gambiae AGAP009810 N 0.704
CBN02296 Caenorhabditis brenneri CBN02296 N 0.704
CJA08769 Caenorhabditis japonica CJA08769 N 0.704