Aqu1.226474 (Amphimedon queenslandica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Aqu1.226474 T49032_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.226474 RRM 12 82

Links

Other RRM family RBPs
Other Amphimedon queenslandica RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PPIE Monodelphis domestica ENSMODG00000017659 N 0.803
PPIE Gallus gallus ENSGALG00000013383 N 0.803
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.803
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.789
PPIE Loxodonta africana ENSLAFG00000028312 N 0.789
PPIE Microcebus murinus ENSMICG00000016676 N 0.789
LOC100054282 Equus caballus ENSECAG00000024285 N 0.789
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.789
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.789
LOC100054084 Equus caballus ENSECAG00000008955 N 0.789
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.789
PPIE Homo sapiens ENSG00000084072 N 0.789
PPIE Macaca mulatta ENSMMUG00000018869 N 0.789
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.789
PPIE Sorex araneus ENSSARG00000005703 N 0.789
PPIE Sus scrofa ENSSSCG00000003664 N 0.789
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.789
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.789
PPIE Pan troglodytes ENSPTRG00000000577 N 0.789
PPIE Canis familiaris ENSCAFG00000003031 N 0.789
Ppie Mus musculus ENSMUSG00000028651 N 0.789
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.789
AAI23372 Xenopus laevis AAI23372 N 0.789
PPIE Cavia porcellus ENSCPOG00000007365 N 0.778
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.775
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.775
ppie Danio rerio ENSDARG00000059270 N 0.775
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.775
PPIE Oryzias latipes ENSORLG00000017469 N 0.775
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.775
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.775
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.775
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.775
PPIE Anolis carolinensis ENSACAG00000002688 N 0.775
ENSCING00000003116 Ciona intestinalis ENSCING00000003116 N 0.775
Bm1_52100 Brugia malayi Bm1_52100 N 0.761
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.761
ENSPPYG00000001501 Pongo pygmaeus ENSPPYG00000001501 N 0.761
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.761
WUBG_08965 Wuchereria bancrofti WUBG_08965 N 0.761
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.761
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.761
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.761
ISCW002449 Ixodes scapularis ISCW002449 N 0.761
Ame_R020475 Ailuropoda melanoleuca Ame_R020475 N 0.746
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.746
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.746
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.746
PPIE Felis catus ENSFCAG00000006027 N 0.746
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.746
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.732
Minc06529 Meloidogyne incognita Minc06529 N 0.732
CJA08769 Caenorhabditis japonica CJA08769 N 0.732
AGAP009810 Anopheles gambiae AGAP009810 N 0.732
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.732
PHUM293600 Pediculus humanus PHUM293600 N 0.732
LOAG_00807 Loa loa LOAG_00807 N 0.732
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.732
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.732
estExt_fgeneshTA2_pm.C_70022 Trichoplax adhaerens estExt_fgeneshTA2_pm.C_70022 N 0.718
107863 Helobdella robusta 107863 N 0.718
CAOG_01587 Capsaspora owczarzaki CAOG_01587 N 0.718
CBG00420 Caenorhabditis briggsae CBG00420 N 0.718
CRE28739 Caenorhabditis remanei CRE28739 N 0.718
AAEL013948 Aedes aegypti AAEL013948 N 0.718
cyn-13 Caenorhabditis elegans Y116A8C.34 N 0.704
CPIJ008841 Culex quinquefasciatus CPIJ008841 N 0.704
CpipJ_CPIJ008841 Culex pipiens CpipJ_CPIJ008841 N 0.704
CBN02296 Caenorhabditis brenneri CBN02296 N 0.704